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Related papers: Graphons: A Nonparametric Method to Model, Estimat…

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Various graphs such as web or social networks may contain up to trillions of edges. Compressing such datasets can accelerate graph processing by reducing the amount of I/O accesses and the pressure on the memory subsystem. Yet, selecting a…

Data Structures and Algorithms · Computer Science 2019-04-30 Maciej Besta , Torsten Hoefler

Lots of learning tasks require dealing with graph data which contains rich relation information among elements. Modeling physics systems, learning molecular fingerprints, predicting protein interface, and classifying diseases demand a model…

Machine Learning · Computer Science 2021-10-07 Jie Zhou , Ganqu Cui , Shengding Hu , Zhengyan Zhang , Cheng Yang , Zhiyuan Liu , Lifeng Wang , Changcheng Li , Maosong Sun

Representing various networked data as multiplex networks, networks of networks and other multilayer networks can reveal completely new types of structures in these system. We introduce a general and principled graphlet framework for…

Physics and Society · Physics 2022-04-22 Sallamari Sallmen , Tarmo Nurmi , Mikko Kivelä

Graph Neural Networks (GNNs) are widely used deep learning models that learn meaningful representations from graph-structured data. Due to the finite nature of the underlying recurrent structure, current GNN methods may struggle to capture…

Machine Learning · Computer Science 2021-06-02 Fangda Gu , Heng Chang , Wenwu Zhu , Somayeh Sojoudi , Laurent El Ghaoui

Embedding networks into a fixed dimensional feature space, while preserving its essential structural properties is a fundamental task in graph analytics. These feature vectors (graph descriptors) are used to measure the pairwise similarity…

Databases · Computer Science 2020-02-20 Zohair Raza Hassan , Mudassir Shabbir , Imdadullah Khan , Waseem Abbas

The prediction of graph evolution is an important and challenging problem in the analysis of networks and of the Web in particular. But while the appearance of new links is part of virtually every model of Web growth, the disappearance of…

Social and Information Networks · Computer Science 2014-03-20 Julia Preusse , Jérôme Kunegis , Matthias Thimm , Sergej Sizov

Complex networks are universal, arising in fields as disparate as sociology, physics, and biology. In the past decade, extensive research into the properties and behaviors of complex systems has uncovered surprising commonalities among the…

Other Quantitative Biology · Quantitative Biology 2015-06-26 Claire Christensen , Reka Albert

Graph neural networks (GNNs) are the de facto standard deep learning architectures for machine learning on graphs. This has led to a large body of work analyzing the capabilities and limitations of these models, particularly pertaining to…

Machine Learning · Computer Science 2024-11-11 Sam Adam-Day , Theodor Mihai Iliant , İsmail İlkan Ceylan

Networks are a powerful abstraction with applicability to a variety of scientific fields. Models explaining their morphology and growth processes permit a wide range of phenomena to be more systematically analysed and understood. At the…

Neural and Evolutionary Computing · Computer Science 2020-04-27 Telmo Menezes , Camille Roth

In recent years, methods from network science are gaining rapidly interest in economics and finance. A reason for this is that in a globalized world the interconnectedness among economic and financial entities are crucial to understand and…

Network sampling is integral to the analysis of social, information, and biological networks. Since many real-world networks are massive in size, continuously evolving, and/or distributed in nature, the network structure is often sampled in…

Social and Information Networks · Computer Science 2012-11-16 Nesreen K. Ahmed , Jennifer Neville , Ramana Kompella

Graphons are continuous models that represent the structure of graphs and allow the generation of graphs of varying sizes. We propose Scalable Implicit Graphon Learning (SIGL), a scalable method that combines implicit neural representations…

Machine Learning · Statistics 2025-05-23 Ali Azizpour , Nicolas Zilberstein , Santiago Segarra

Network comparison is a widely-used tool for analyzing complex systems, with applications in varied domains including comparison of protein interactions or highlighting changes in structure of trade networks. In recent years, a number of…

Social and Information Networks · Computer Science 2023-03-09 Miguel E. P. Silva , Robert E. Gaunt , Luis Ospina-Forero , Caroline Jay , Thomas House

Graph neural networks (GNNs) have received great attention due to their success in various graph-related learning tasks. Several GNN frameworks have then been developed for fast and easy implementation of GNN models. Despite their…

Machine Learning · Computer Science 2022-11-08 Xin Huang , Jongryool Kim , Bradley Rees , Chul-Ho Lee

We propose a novel and principled method to learn a nonparametric graph model called graphon, which is defined in an infinite-dimensional space and represents arbitrary-size graphs. Based on the weak regularity lemma from the theory of…

Machine Learning · Computer Science 2020-12-18 Hongteng Xu , Dixin Luo , Lawrence Carin , Hongyuan Zha

We introduce Graph-Structured Sum-Product Networks (GraphSPNs), a probabilistic approach to structured prediction for problems where dependencies between latent variables are expressed in terms of arbitrary, dynamic graphs. While many…

Machine Learning · Computer Science 2017-11-23 Kaiyu Zheng , Andrzej Pronobis , Rajesh P. N. Rao

Graph neural networks (GNNs) are a popular class of machine learning models whose major advantage is their ability to incorporate a sparse and discrete dependency structure between data points. Unfortunately, GNNs can only be used when such…

Machine Learning · Computer Science 2020-06-22 Luca Franceschi , Mathias Niepert , Massimiliano Pontil , Xiao He

Graph Neural Networks (GNNs) are an emerging research field. This specialized Deep Neural Network (DNN) architecture is capable of processing graph structured data and bridges the gap between graph processing and Deep Learning (DL). As…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-05-24 Jana Vatter , Ruben Mayer , Hans-Arno Jacobsen

We propose a method for characterizing large complex networks by introducing a new matrix structure, unique for a given network, which encodes structural information; provides useful visualization, even for very large networks; and allows…

Disordered Systems and Neural Networks · Physics 2008-02-28 J. P. Bagrow , E. M. Bollt , J. D. Skufca , D. ben-Avraham

Graphon models provide a flexible nonparametric framework for estimating latent connectivity probabilities in networks, enabling a range of downstream applications such as link prediction and data augmentation. However, accurate graphon…

Machine Learning · Computer Science 2025-10-28 Yuyao Wang , Yu-Hung Cheng , Debarghya Mukherjee , Huimin Cheng