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Segmentation of objects in microscopy images is required for many biomedical applications. We introduce object-centric embeddings (OCEs), which embed image patches such that the spatial offsets between patches cropped from the same object…

Machine Learning · Computer Science 2023-10-13 Steffen Wolf , Manan Lalit , Henry Westmacott , Katie McDole , Jan Funke

In the domain of battery research, the processing of high-resolution microscopy images is a challenging task, as it involves dealing with complex images and requires a prior understanding of the components involved. The utilization of deep…

Computer Vision and Pattern Recognition · Computer Science 2025-03-19 Ganesh Raghavendran , Bing Han , Fortune Adekogbe , Shuang Bai , Bingyu Lu , William Wu , Minghao Zhang , Ying Shirley Meng

Computer vision has become a major source of information for autonomous navigation of robots of various types, self-driving cars, military robots and mars/lunar rovers are some examples. Nevertheless, the majority of methods focus on…

Computer Vision and Pattern Recognition · Computer Science 2016-04-12 Artem Lenskiy

Event-based cameras are bio-inspired sensors with pixels that independently and asynchronously respond to brightness changes at microsecond resolution, offering the potential to handle visual tasks in challenging scenarios. However, due to…

Computer Vision and Pattern Recognition · Computer Science 2026-02-25 Sheng Zhong , Zhongyang Ren , Xiya Zhu , Dehao Yuan , Cornelia Fermuller , Yi Zhou

Image segmentation is a central topic in image processing and computer vision and a key issue in many applications, e.g., in medical imaging, microscopy, document analysis and remote sensing. According to the human perception, image…

Numerical Analysis · Mathematics 2022-06-24 Laura Antonelli , Valentina De Simone , Daniela di Serafino

Living cell segmentation from bright-field light microscopy images is challenging due to the image complexity and temporal changes in the living cells. Recently developed deep learning (DL)-based methods became popular in medical and…

Quantitative Methods · Quantitative Biology 2022-07-07 Ali Ghaznavi , Renata Rychtarikova , Mohammadmehdi Saberioon , Dalibor Stys

The rapid development of deep learning has made a great progress in image segmentation, one of the fundamental tasks of computer vision. However, the current segmentation algorithms mostly rely on the availability of pixel-level…

Computer Vision and Pattern Recognition · Computer Science 2023-02-16 Wei Shen , Zelin Peng , Xuehui Wang , Huayu Wang , Jiazhong Cen , Dongsheng Jiang , Lingxi Xie , Xiaokang Yang , Qi Tian

Segmentation has been a major task in neuroimaging. A large number of automated methods have been developed for segmenting healthy and diseased brain tissues. In recent years, deep learning techniques have attracted a lot of attention as a…

Image and Video Processing · Electrical Eng. & Systems 2019-07-05 Jimit Doshi , Guray Erus , Mohamad Habes , Christos Davatzikos

In this paper, we introduce and study a novel segmentation method for 4D images based on surface evolution governed by a nonlinear partial differential equation, the generalized subjective surface equation. The new method uses 4D digital…

Numerical Analysis · Mathematics 2022-06-30 Markjoe Olunna Uba , Karol Mikula , Seol Ah Park

This paper presents a systematic solution for the intelligent recognition and automatic analysis of microscopy images. We developed a data engine that generates high-quality annotated datasets through a combination of the collection of…

Image and Video Processing · Electrical Eng. & Systems 2025-08-27 Yanhui Hong , Nan Wang , Zhiyi Xia , Haoyi Tao , Xi Fang , Yiming Li , Jiankun Wang , Peng Jin , Xiaochen Cai , Shengyu Li , Ziqi Chen , Zezhong Zhang , Guolin Ke , Linfeng Zhang

Tight-frame, a generalization of orthogonal wavelets, has been used successfully in various problems in image processing, including inpainting, impulse noise removal, super-resolution image restoration, etc. Segmentation is the process of…

Numerical Analysis · Mathematics 2015-03-19 Xiaohao Cai , Raymond Chan , Serena Morigi , Fiorella Sgallari

In this paper, we investigate the impact of segmentation algorithms as a preprocessing step for classification of remote sensing images in a deep learning framework. Especially, we address the issue of segmenting the image into regions to…

Computer Vision and Pattern Recognition · Computer Science 2016-09-23 Nicolas Audebert , Bertrand Le Saux , Sébastien Lefèvre

Standard microscopes offer a variety of settings to help improve the visibility of different specimens to the end microscope user. Increasingly, however, digital microscopes are used to capture images for automated interpretation by…

Image and Video Processing · Electrical Eng. & Systems 2020-10-14 Kanghyun Kim , Pavan Chandra Konda , Colin L. Cooke , Ron Appel , Roarke Horstmeyer

Background Analyzing images to accurately estimate the number of different cell types in the brain using automatic methods is a major objective in neuroscience. The automatic and selective detection and segmentation of neurons would be an…

Image and Video Processing · Electrical Eng. & Systems 2024-10-07 Antonio LaTorre , Lidia Alonso-Nanclares , José María Peña , Javier De Felipe

A good segmentation result depends on a set of "correct" choice for the seeds. When the input images are noisy, the seeds may fall on atypical pixels that are not representative of the region statistics. This can lead to erroneous…

Computer Vision and Pattern Recognition · Computer Science 2014-07-15 Mohammed M. Abdelsamea

We propose and analyze a constrained level-set method for semi-automatic image segmentation. Our level-set model with constraints on the level-set function enables us to specify which parts of the image lie inside respectively outside the…

Numerical Analysis · Mathematics 2014-12-11 Vladimír Klement , Tomáš Oberhuber , Daniel Ševčovič

We propose and analyze a constrained level-set method for semi-automatic image segmentation. Our level-set model with constraints on the level-set function enables us to specify which parts of the image lie inside respectively outside the…

Numerical Analysis · Mathematics 2015-01-07 Vladimír Klement , Tomáš Oberhuber , Daniel Ševčovič

Coherent microscopy techniques provide an unparalleled multi-scale view of materials across scientific and technological fields, from structural materials to quantum devices, from integrated circuits to biological cells. Driven by the…

We propose a new self-supervised approach to image feature learning from motion cue. This new approach leverages recent advances in deep learning in two directions: 1) the success of training deep neural network in estimating optical flow…

Computer Vision and Pattern Recognition · Computer Science 2019-01-10 Bin Ma , Shubao Liu , Yingxuan Zhi , Qi Song

Bright-field microscopy, a cost-effective solution for live-cell culture, is often the only resource available, along with standard CPUs, for many low-budget labs. The inherent challenges of bright-field images -- their noisiness, low…

Quantitative Methods · Quantitative Biology 2025-11-03 Surajit Das , Pavel Zun
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