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It remains challenging to automatically segment kidneys in clinical ultrasound (US) images due to the kidneys' varied shapes and image intensity distributions, although semi-automatic methods have achieved promising performance. In this…

Computer Vision and Pattern Recognition · Computer Science 2019-04-02 Shi Yin , Qinmu Peng , Hongming Li , Zhengqiang Zhang , Xinge You , Susan L. Furth , Gregory E. Tasian , Yong Fan

Automated brain tumour segmentation has the potential of making a massive improvement in disease diagnosis, surgery, monitoring and surveillance. However, this task is extremely challenging. Here, we describe our automated segmentation…

Image and Video Processing · Electrical Eng. & Systems 2020-05-13 Indrajit Mazumdar

In the field of medical image, deep convolutional neural networks(ConvNets) have achieved great success in the classification, segmentation, and registration tasks thanks to their unparalleled capacity to learn image features. However,…

Image and Video Processing · Electrical Eng. & Systems 2022-11-15 Xin Gao

Cardiac magnetic resonance imaging (MRI) is an essential tool for MRI-guided surgery and real-time intervention. The MRI videos are expected to be segmented on-the-fly in real practice. However, existing segmentation methods would suffer…

Image and Video Processing · Electrical Eng. & Systems 2019-09-17 Tianchen Wang , Jinjun Xiong , Xiaowei Xu , Meng Jiang , Yiyu Shi , Haiyun Yuan , Meiping Huang , Jian Zhuang

Segmentation of anatomical shapes from medical images has taken an important role in the automation of clinical measurements. While typical deep-learning segmentation approaches are performed on discrete voxels, the underlying objects being…

Image and Video Processing · Electrical Eng. & Systems 2023-09-19 Nil Stolt-Ansó , Julian McGinnis , Jiazhen Pan , Kerstin Hammernik , Daniel Rueckert

Alterations in the geometry and function of the heart define well-established causes of cardiovascular disease. However, current approaches to the diagnosis of cardiovascular diseases often rely on subjective human assessment as well as…

Computer Vision and Pattern Recognition · Computer Science 2018-07-19 Carlo Biffi , Ozan Oktay , Giacomo Tarroni , Wenjia Bai , Antonio De Marvao , Georgia Doumou , Martin Rajchl , Reem Bedair , Sanjay Prasad , Stuart Cook , Declan O'Regan , Daniel Rueckert

Cardiovascular diseases represent a leading cause of mortality worldwide, necessitating accurate and early diagnosis for improved patient outcomes. Current diagnostic approaches for cardiac abnormalities often present challenges in clinical…

Signal Processing · Electrical Eng. & Systems 2025-11-11 Seyed Amir Latifi , Hassan Ghassemian , Maryam Imani

Recently, many methods based on hand-designed convolutional neural networks (CNNs) have achieved promising results in automatic retinal vessel segmentation. However, these CNNs remain constrained in capturing retinal vessels in complex…

Image and Video Processing · Electrical Eng. & Systems 2021-06-14 Jiahong Wei , Zhun Fan

This paper presents a fully automatic and end-to-end optimised airway segmentation method for thoracic computed tomography, based on the U-Net architecture. We use a simple and low-memory 3D U-Net as backbone, which allows the method to…

Image and Video Processing · Electrical Eng. & Systems 2021-08-04 A. Garcia-Uceda , R. Selvan , Z. Saghir , H. A. W. M. Tiddens , M. de Bruijne

Purpose: To demonstrate the feasibility and performance of a fully automated deep learning framework to estimate myocardial strain from short-axis cardiac magnetic resonance tagged images. Methods and Materials: In this retrospective…

To accurately analyze changes of anatomical structures in longitudinal imaging studies, consistent segmentation across multiple time-points is required. Existing solutions often involve independent registration and segmentation components.…

Image and Video Processing · Electrical Eng. & Systems 2019-08-28 Bo Li , Wiro Niessen , Stefan Klein , Marius de Groot , Arfan Ikram , Meike Vernooij , Esther Bron

Sub-cortical brain structure segmentation in Magnetic Resonance Images (MRI) has attracted the interest of the research community for a long time because morphological changes in these structures are related to different neurodegenerative…

Computer Vision and Pattern Recognition · Computer Science 2018-11-15 Kaisar Kushibar , Sergi Valverde , Sandra Gonzalez-Villa , Jose Bernal , Mariano Cabezas , Arnau Oliver , Xavier Llado

Longitudinal MRI analysis is crucial for predicting disease outcomes, particularly in chronic conditions like hepatocellular carcinoma (HCC), where early detection can significantly influence treatment strategies and patient prognosis. Yet,…

Computer Vision and Pattern Recognition · Computer Science 2025-01-23 Jakob Nolte , Maureen M. J. Guichelaar , Donald E. Bouman , Stephanie M. van den Berg , Maryam Amir Haeri

In this work, we present a fully automatic method to segment cardiac structures from late-gadolinium enhanced (LGE) images without using labelled LGE data for training, but instead by transferring the anatomical knowledge and features…

Image and Video Processing · Electrical Eng. & Systems 2020-02-06 Chen Chen , Cheng Ouyang , Giacomo Tarroni , Jo Schlemper , Huaqi Qiu , Wenjia Bai , Daniel Rueckert

Accurate automatic segmentation of brain anatomy from $T_1$-weighted~($T_1$-w) magnetic resonance images~(MRI) has been a computationally intensive bottleneck in neuroimaging pipelines, with state-of-the-art results obtained by unsupervised…

Computer Vision and Pattern Recognition · Computer Science 2018-08-01 Amod Jog , Bruce Fischl

Recovering the 3D motion of the heart from cine cardiac magnetic resonance (CMR) imaging enables the assessment of regional myocardial function and is important for understanding and analyzing cardiovascular disease. However, 3D cardiac…

Image and Video Processing · Electrical Eng. & Systems 2022-08-02 Qingjie Meng , Chen Qin , Wenjia Bai , Tianrui Liu , Antonio de Marvao , Declan P O'Regan , Daniel Rueckert

Early detection of coronary artery disease (CAD) is critical for reducing mortality and improving patient treatment planning. While angiographic image analysis from X-rays is a common and cost-effective method for identifying cardiac…

Computer Vision and Pattern Recognition · Computer Science 2026-03-04 Alvee Hassan , Rusab Sarmun , Muhammad E. H. Chowdhury , M Murugappan , Abdulrahman Alqahtani , Balamurugan Balusamy , Sohaib Bassam Zoghoul

Automatic segmentation of abdomen organs using medical imaging has many potential applications in clinical workflows. Recently, the state-of-the-art performance for organ segmentation has been achieved by deep learning models, i.e.,…

Computer Vision and Pattern Recognition · Computer Science 2019-10-16 Jinzheng Cai , Yingda Xia , Dong Yang , Daguang Xu , Lin Yang , Holger Roth

We propose two deep neural network architectures for classification of arbitrary-length electrocardiogram (ECG) recordings and evaluate them on the atrial fibrillation (AF) classification data set provided by the PhysioNet/CinC Challenge…

Machine Learning · Computer Science 2018-04-10 Martin Zihlmann , Dmytro Perekrestenko , Michael Tschannen

Neuroanatomical segmentation in magnetic resonance imaging (MRI) of the brain is a prerequisite for volume, thickness and shape measurements. This work introduces a new highly accurate and versatile method based on 3D convolutional neural…

Quantitative Methods · Quantitative Biology 2019-02-07 Philip Novosad , Vladimir Fonov , D. Louis Collins
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