Related papers: Multilayer Codes for Synchronization from Deletion…
Motivated by the sequence reconstruction problem from traces in DNA-based storage, we consider the problem of designing codes for the deletion channel when multiple observations (or traces) are available to the decoder. We propose simple…
Varshamov-Tenengolts (VT) codes are a class of codes which can correct a single deletion or insertion with a linear-time decoder. This paper addresses the problem of efficient encoding of non-binary VT codes, defined over an alphabet of…
List decoding of insertions and deletions in the Levenshtein metric is considered. The Levenshtein distance between two sequences is the minimum number of insertions and deletions needed to turn one of the sequences into the other. In this…
This work studies problems in data reconstruction, an important area with numerous applications. In particular, we examine the reconstruction of binary and non-binary sequences from synchronization (insertion/deletion-correcting) codes.…
Consider two remote nodes having binary sequences $X$ and $Y$, respectively. $Y$ is an edited version of ${X}$, where the editing involves random deletions, insertions, and substitutions, possibly in bursts. The goal is for the node with…
In this work, we consider the problem of efficient decoding of codes from insertions and deletions. Most of the known efficient codes are codes with synchronization strings which allow one to reduce the problem of decoding insertions and…
We consider the problem of constructing codes that can correct $\delta$ deletions occurring in an arbitrary binary string of length $n$ bits. Varshamov-Tenengolts (VT) codes, dating back to 1965, are zero-error single deletion $(\delta=1)$…
The number-theoretic codes are a class of codes defined by single or multiple congruences and are mainly used for correcting insertion and deletion errors. Since the number-theoretic codes are generally non-linear, the analysis method for…
An insdel refers to a deletion or an insertion, and an edit refers to an insdel or a substitution. In this paper, we consider the segmented single-insdel (resp. single-edit) channel, where the channel's input bit stream is partitioned into…
A permutation code is a nonlinear code whose codewords are permutation of a set of symbols. We consider the use of permutation code in the deletion channel, and consider the symbol-invariant error model, meaning that the values of the…
This paper considers insertion and deletion channels with the additional assumption that the channel input sequence is implicitly divided into segments such that at most one edit can occur within a segment. No segment markers are available…
Practical random network coding based schemes for multicast include a header in each packet that records the transformation between the sources and the terminal. The header introduces an overhead that can be significant in certain…
We study the problem of retrieving data from a channel that breaks the input sequence into a set of unordered fragments of random lengths, which we refer to as the chop-and-shuffle channel. The length of each fragment follows a geometric…
We present new constructions of codes for asymmetric channels for both binary and nonbinary alphabets, based on methods of generalized code concatenation. For the binary asymmetric channel, our methods construct nonlinear…
Decoding sequences that stem from multiple transmissions of a codeword over an insertion, deletion, and substitution channel is a critical component of efficient deoxyribonucleic acid (DNA) data storage systems. In this paper, we consider a…
In this paper, we consider a synchronization problem between nodes $A$ and $B$ that are connected through a two--way communication channel. {Node $A$} contains a binary file $X$ of length $n$ and {node $B$} contains a binary file $Y$ that…
Recently, Martinez-Penas and Kschischang (IEEE Trans. Inf. Theory, 2019) showed that lifted linearized Reed-Solomon codes are suitable codes for error control in multishot network coding. We show how to construct and decode lifted…
In recent years, widespread attention has been drawn to the challenge of correcting insertion, deletion, and substitution (IDS) errors in DNA-based data storage. Among various IDS-correcting codes, Varshamov-Tenengolts (VT) codes,…
We study segmented burst-deletion channels motivated by the observation that synchronization errors commonly occur in a bursty manner in real-world settings. In this channel model, transmitted sequences are implicitly divided into…
Error correction codes are a crucial part of the physical communication layer, ensuring the reliable transfer of data over noisy channels. The design of optimal linear block codes capable of being efficiently decoded is of major concern,…