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High-dimensional clinical data have become invaluable resources for genetic studies, due to their accessibility in biobank-scale datasets and the development of high performance modeling techniques especially using deep learning. Recent…

Machine Learning · Computer Science 2023-07-19 Taedong Yun

Motivation: Structural heterogeneity in single-particle cryo-electron microscopy (cryo-EM) data represents a major challenge for high-resolution structure determination. Unsupervised classification may serve as the first step in the…

Data Analysis, Statistics and Probability · Physics 2017-11-01 Jiayi Wu , Yong-Bei Ma , Charles Congdon , Bevin Brett , Shuobing Chen , Qi Ouyang , Youdong Mao

Sky surveys are the largest data generators in astronomy, making automated tools for extracting meaningful scientific information an absolute necessity. We show that, without the need for labels, self-supervised learning recovers…

Instrumentation and Methods for Astrophysics · Physics 2022-06-30 Md Abul Hayat , George Stein , Peter Harrington , Zarija Lukić , Mustafa Mustafa

Although deep learning are commonly employed for image recognition, usually huge amount of labeled training data is required, which may not always be readily available. This leads to a noticeable performance disparity when compared to…

Computer Vision and Pattern Recognition · Computer Science 2024-02-08 Enoch Solomon , Abraham Woubie , Eyael Solomon Emiru

Cellular electron cryo-tomography enables the 3D visualization of cellular organization in the near-native state and at submolecular resolution. However, the contents of cellular tomograms are often complex, making it difficult to…

Quantitative Methods · Quantitative Biology 2017-12-29 Xiangrui Zeng , Miguel Ricardo Leung , Tzviya Zeev-Ben-Mordehai , Min Xu

Defining templates of galaxy spectra is useful to quickly characterise new observations and organise databases from surveys. These templates are usually built from a pre-defined classification based on other criteria. Aims. We present an…

Astrophysics of Galaxies · Physics 2021-05-12 Didier Fraix-Burnet , C. Bouveyron , J. Moultaka

Measuring the physical properties of galaxies such as redshift frequently requires the use of Spectral Energy Distributions (SEDs). SED template sets are, however, often small in number and cover limited portions of photometric color space.…

Instrumentation and Methods for Astrophysics · Physics 2017-12-13 J. Bryce Kalmbach , Andrew J. Connolly

Entering the era of large-scale galaxy surveys which will deliver unprecedented amounts of photometric and spectroscopic data, there is a growing need for more efficient, data driven, and less model-dependent techniques to analyze spectral…

Astrophysics of Galaxies · Physics 2023-12-01 Marziye Jafariyazani , Daniel Masters , Andreas Faisst , Harry Teplitz , Olivier Ilbert

We develop Self2Seg, a self-supervised method for the joint segmentation and denoising of a single image. To this end, we combine the advantages of variational segmentation with self-supervised deep learning. One major benefit of our method…

Computer Vision and Pattern Recognition · Computer Science 2024-04-30 Nadja Gruber , Johannes Schwab , Noémie Debroux , Nicolas Papadakis , Markus Haltmeier

The success of deep neural networks often relies on a large amount of labeled examples, which can be difficult to obtain in many real scenarios. To address this challenge, unsupervised methods are strongly preferred for training neural…

Computer Vision and Pattern Recognition · Computer Science 2019-03-26 Liheng Zhang , Guo-Jun Qi , Liqiang Wang , Jiebo Luo

Autoencoders are widely used in machine learning applications, in particular for anomaly detection. Hence, they have been introduced in high energy physics as a promising tool for model-independent new physics searches. We scrutinize the…

High Energy Physics - Phenomenology · Physics 2021-07-15 Thorben Finke , Michael Krämer , Alessandro Morandini , Alexander Mück , Ivan Oleksiyuk

We present a novel approach for the dimensionality reduction of galaxy images by leveraging a combination of variational auto-encoders (VAE) and domain adaptation (DA). We demonstrate the effectiveness of this approach using a sample of low…

We seek to find a shapelet-based scheme for deconvolving galaxy images from the PSF which leads to unbiased shear measurements. Based on the analytic formulation of convolution in shapelet space, we construct a procedure to recover the…

Astrophysics · Physics 2015-03-03 Peter Melchior , Rene Andrae , Matteo Maturi , Matthias Bartelmann

Recently, deep learning approaches have become the main research frontier for biological image reconstruction and enhancement problems thanks to their high performance, along with their ultra-fast inference times. However, due to the…

Image and Video Processing · Electrical Eng. & Systems 2022-03-18 Mehmet Akçakaya , Burhaneddin Yaman , Hyungjin Chung , Jong Chul Ye

In this work we explore the possibility of applying machine learning methods designed for one-dimensional problems to the task of galaxy image classification. The algorithms used for image classification typically rely on multiple costly…

Astrophysics of Galaxies · Physics 2022-02-23 F. Tarsitano , C. Bruderer , K. Schawinski , W. G. Hartley

Galaxy morphology offers significant insights into the evolutionary pathways and underlying physics of galaxies. As astronomical data grows with surveys such as Euclid and Vera C. Rubin , there is a need for tools to classify and analyze…

Instrumentation and Methods for Astrophysics · Physics 2024-01-18 I. Kolesnikov , V. M. Sampaio , R. R. de Carvalho , C. Conselice , S. B. Rembold , C. L. Mendes , R. R. Rosa

A fundamental bimodality of galaxies in the local Universe is apparent in many of the features used to describe them. Multiple sub-populations exist within this framework, each representing galaxies following distinct evolutionary pathways.…

Unsupervised localization and segmentation are long-standing computer vision challenges that involve decomposing an image into semantically-meaningful segments without any labeled data. These tasks are particularly interesting in an…

Computer Vision and Pattern Recognition · Computer Science 2022-05-17 Luke Melas-Kyriazi , Christian Rupprecht , Iro Laina , Andrea Vedaldi

We present a novel unsupervised learning approach to automatically segment and label images in astronomical surveys. Automation of this procedure will be essential as next-generation surveys enter the petabyte scale: data volumes will…

Instrumentation and Methods for Astrophysics · Physics 2015-07-08 Alex Hocking , James E. Geach , Neil Davey , Yi Sun

We present the use of self-supervised learning to explore and exploit large unlabeled datasets. Focusing on 42 million galaxy images from the latest data release of the Dark Energy Spectroscopic Instrument (DESI) Legacy Imaging Surveys, we…

Instrumentation and Methods for Astrophysics · Physics 2021-12-02 George Stein , Peter Harrington , Jacqueline Blaum , Tomislav Medan , Zarija Lukic
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