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The abundance, temperature, and clustering of metals in the intergalactic medium are important parameters for understanding their cosmic evolution and quantifying their impact on cosmological analysis with the Ly $\alpha$ forest. The…

Because most chemical or biological experiments are performed under conditions of controlled pressure and temperature, it is important to simulate the isobaric-isothermal ensemble at the atomic level to reveal the microscopic mechanism. By…

Statistical Mechanics · Physics 2025-04-14 Weihao Liang , Sihan Wang , Cong Wang , Weizhou Wang , Xinchen She , Chongbin Wang , Jiushu Shao , Jian Liu

We introduce an efficient and accurate alternative to full hydrodynamic simulations, Hydro-PM (HPM), for the study of the low column density Lyman-alpha forest. It consists of a Particle-Mesh solver, modified to compute, in addition to the…

Astrophysics · Physics 2009-10-30 Nickolay Y. Gnedin , Lam Hui

We have measured the transmission of the Lyman alpha forest produced by neutral hydrogen scattering in the intergalactic medium between redshifts 2 and 6.3 using high signal to noise, high resolution (R > 5000) observations of 50 quasars…

Astrophysics · Physics 2011-05-05 Antoinette Songaila

We present a random forest framework for predicting circumgalactic medium (CGM) physical conditions from quasar absorption line observables, trained on a sample of Voigt profile-fit synthetic absorbers from the Simba cosmological…

Astrophysics of Galaxies · Physics 2023-07-25 Sarah Appleby , Romeel Davé , Daniele Sorini , Christopher Lovell , Kevin Lo

We present a measurement of the Lyman alpha flux probability distribution function (PDF) measured from a set of eight high resolution quasar spectra with emission redshifts at 3.3 < z < 3.8. We carefully study the effect of metal absorption…

Cosmology and Nongalactic Astrophysics · Physics 2015-06-03 F. Calura , E. Tescari , V. D'Odorico , M. Viel , S. Cristiani , T. -S. Kim , J. S. Bolton

Inelastic collisions and elementary chemical reactions proceeding through the formation and subsequent decay of an intermediate collision complex, with an associated deep well on the potential energy surface, pose a challenge for accurate…

Chemical Physics · Physics 2022-06-10 Maarten Konings , Benjamin Desrousseaux , François Lique , Jérôme Loreau

We study the dynamics of phase transitions in the interstellar medium by means of three-dimensional hydrodynamic numerical simulations. We use a realistic cooling function and generic nonequilibrium initial conditions to follow the…

Astrophysics · Physics 2009-11-07 Alexei G. Kritsuk , Michael L. Norman

We examine the problem of the collapse and fragmentation of molecular clouds with a Gaussian density distribution with high resolution, double precision numerical simulations using the GADGET-2 code. To describe the thermodynamic properties…

Solar and Stellar Astrophysics · Physics 2026-02-27 F. Gomez-Ramirez , J. Klapp , Jorge L. Cervantes-Cota , G. Arreaga-Garcia , D. Bahena

We discuss the implementation of Bayesian inversion methods in order to recover the properties of the intergalactic medium from observations of the neutral hydrogen Lyman-$\alpha$ absorptions observed in the spectra of high redshift quasars…

Astrophysics · Physics 2009-11-06 C. Pichon , J. L. Vergely , E. Rollinde , S. Colombi , P. Petitjean

During the past decades, approximate Kohn-Sham density-functional theory schemes garnered many successes in computational chemistry and physics; yet the performance in the prediction of spin state energetics is often unsatisfactory. By…

Other Condensed Matter · Physics 2023-05-05 Joao Paulo Almeida de Mendonca , Lorenzo A. Mariano , Emilie Devijver , Noel Jakse , Roberta Poloni

A theoretical study of the variation of thermodynamic and transport properties of calamitic liquid crystals across the isotropic-nematic phase transition is carried out by calculating the {\it wavenumber (k) and time (t)} dependent…

Soft Condensed Matter · Physics 2008-02-18 Prasanth P. Jose , Biman Bagchi

An experiment of thermal convection with significant compressible effects is presented. The high-gravity environment of a centrifuge and the choice of xenon gas enable us to observe an average adiabatic temperature gradient up to 3.5 K…

By using a novel interface between the modern smoothed particle hydrodynamics code GASOLINE2 and the chemistry package KROME, we follow the hydrodynamical and chemical evolution of an isolated galaxy. In order to assess the relevance of…

Astrophysics of Galaxies · Physics 2018-01-24 Pedro R. Capelo , Stefano Bovino , Alessandro Lupi , Dominik R. G. Schleicher , Tommaso Grassi

We use hydrodynamic simulations to predict correlations between Lya forest absorption and galaxies at redshift z~3. The probability distribution function (PDF) of Lya flux decrements shifts systematically towards higher values in the…

Astrophysics · Physics 2009-11-07 Juna A. Kollmeier , David H. Weinberg , Romeel Dave' , Neal Katz

In a previous paper, we calculated numerical hydrodynamic models of the interstellar medium in the Galaxy, which suggested that hot gas (T $\ge$ 3 $\times$ 10$^5$ K) has a filling factor near 50\% in the midplane (Rosen \& Bregman 1995, ApJ…

Astrophysics · Physics 2009-10-28 Alexander Rosen , Joel N. Bregman , Daniel D. Kelson

We present a highly efficient method to directly simulate the photodissociation followed by Coulomb explosion of methyl iodide. In order to achieve statistical reliability, more than 40,000 trajectories are calculated on accurate potential…

Chemical Physics · Physics 2024-11-06 Yijue Ding , Loren Greenman , Daniel Rolles

This study proposes a new method for predicting the crystal-melt interfacial free energy ($\gamma$) using the Ginzburg-Landau (GL) model, enhanced by atomistic simulation data for more accurate density wave profiles. The analysis focuses on…

Materials Science · Physics 2025-04-09 Ya-Shen Wang , Zun Liang , Brian B. Laird , Yang Yang

We present new simulations of Lyman-$\alpha$ (Ly$\alpha$) intensity maps that include Ly$\alpha$ radiative transfer in the intergalactic medium (IGM) and all significant sources of Ly$\alpha$ photons. The sources considered include…

Astrophysics of Galaxies · Physics 2025-08-29 Abigail E. Ambrose , Eli Visbal , Mihir Kulkarni , Matthew McQuinn

Hydrodynamic simulations predict that a significant fraction of the gas in the current Universe is in the form of high temperature, highly ionized plasma emitting and absorbing primarily in the soft X-ray and UV bands, dubbed the Warm-Hot…

Cosmology and Nongalactic Astrophysics · Physics 2010-08-31 Eugenio Ursino , Massimiliano Galeazzi , Mauro Roncarelli