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The magnitude and variability of Earth's biodiversity have puzzled scientists ever since paleontologic fossil databases became available. We identify and study a model of interdependent species where both endogenous and exogenous impacts…

Populations and Evolution · Quantitative Biology 2014-10-10 Frank Stollmeier , Theo Geisel , Jan Nagler

Predator-prey coevolution is commonly thought to result in reciprocal arms races that produce increasingly extreme and complex traits. However, such directional change is not inevitable. Here, we provide evidence for a previously…

Populations and Evolution · Quantitative Biology 2014-02-18 Aaron P Wagner , Luis Zaman , Ian Dworkin , Charles Ofria

The natural evolution of life seems to proceed through steps characterized by phases of relatively rapid changes, followed by longer, more stable periods. In the light of the string-theory derived physical scenario proposed in [1], we…

General Physics · Physics 2007-12-06 Andrea Gregori

Phenotypic heterogeneity is a strategy commonly used by bacteria to rapidly adapt to changing environmental conditions. Here, we study the interplay between phenotypic heterogeneity and genetic diversity in spatially extended populations.…

Populations and Evolution · Quantitative Biology 2014-09-05 Steffen Rulands , David Jahn , Erwin Frey

The dynamics of ecosystem collapse are fundamental to determining how and why biological communities change through time, as well as the potential effects of extinctions on ecosystems. Here we integrate depictions of mammals from Egyptian…

Populations and Evolution · Quantitative Biology 2014-09-25 Justin D. Yeakel , Mathias M. Pires , Lars Rudolf , Nathaniel J. Dominy , Paul L. Koch , Paulo R. Guimarães , Thilo Gross

The discovery of a truly habitable exoplanet would be one of the most important events in the history of science. However, the nature and distribution of habitable environments on exoplanets is currently unconstrained. The exoplanet…

One of the longstanding debates in the history of paleontology focuses on the issue of whether or not there have been long term cycles (operating over tens of millions of years) in biodiversity and extinction. Here we consider the history…

Earth and Planetary Astrophysics · Physics 2012-06-11 B. S. Lieberman , A. L. Melott

Our understanding of the evolutionary process has gone a long way since the publication, 150 years ago, of "On the origin of species" by Charles R. Darwin. The XXth Century witnessed great efforts to embrace replication, mutation, and…

Populations and Evolution · Quantitative Biology 2012-02-02 Susanna C. Manrubia , Jose A. Cuesta

We observe returns of a simple random walk on a finite graph to a fixed node, and would like to infer properties of the graph, in particular properties of the spectrum of the transition matrix. This is not possible in general, but at least…

Probability · Mathematics 2007-05-23 Itai Benjamini , Gady Kozma , Laszlo Lovasz , Dan Romik , Gabor Tardos

Bacteria and their bacteriophages are the most abundant, widespread and diverse groups of biological entities on the planet. In an attempt to understand how the interactions between bacteria, virulent phages and temperate phages might…

Populations and Evolution · Quantitative Biology 2009-11-13 Martin Rosvall , Ian B. Dodd , Sandeep Krishna , Kim Sneppen

The continuity of life and its evolution, we proposed, emerge from an interactive group process manifested in networks of interaction. We term this process \textit{survival-of-the-fitted}. Here, we reason that survival of the fitted results…

Neural and Evolutionary Computing · Computer Science 2025-06-17 Irun R. Cohen , Assaf Marron

A hypothesis of the evolution of the genetic code is proposed, the leading mechanism of which is the nucleotide spontaneous damage leading to AT-enrichment of the genome. The hypothesis accounts for stability of the genetic code towards…

Populations and Evolution · Quantitative Biology 2007-10-03 Denis A. Semenov

Stars and their exoplanets evolve together. Depending on the physical characteristics of these systems, such as age, orbital distance and activity of the host stars, certain types of star-exoplanet interactions can dominate during given…

Solar and Stellar Astrophysics · Physics 2020-09-30 A. A. Vidotto

Bio-loggers, electronic devices used to track animal behaviour through various sensors, have become essential in wildlife research. Despite continuous improvements in their capabilities, bio-loggers still face significant limitations in…

Machine Learning · Computer Science 2025-03-14 Wilhelm Kerle-Malcharek , Karsten Klein , Martin Wikelski , Falk Schreiber , Timm A. Wild

A list of open problems on global behavior in time of some evolution systems, mainly governed by P.D.E, is given together with some background information explaining the context in which these problems appeared. The common characteristic of…

Analysis of PDEs · Mathematics 2015-12-22 Alain Haraux

Protein dynamics form a critical bridge between protein structure and function, yet the impact of evolution on ultrafast processes inside proteins remains enigmatic. This study delves deep into nanosecond-scale protein dynamics of a…

Biological Physics · Physics 2023-09-13 Philipp J. Heckmeier , Jeannette Ruf , Charlotte Rochereau , Peter Hamm

Mortality is an instrument of natural selection. Evolutionary motivated theories imply its irreversibility and life history dependence. This is inconsistent with mortality data for protected populations. Accurate analysis yields mortality…

Other Quantitative Biology · Quantitative Biology 2007-05-23 Mark Ya. Azbel'

The selection pressures that have shaped the evolution of complex traits in humans remain largely unknown, and in some contexts highly contentious, perhaps above all where they concern mean trait differences among groups. To date, the…

Populations and Evolution · Quantitative Biology 2020-10-08 Arbel Harpak , Molly Przeworski

The satellites of extrasolar planets (exomoons) have been recently proposed as astrobiological targets. Since giant planets in the habitable zone are thought to have migrated there, it is possible that they may have captured a former…

Earth and Planetary Astrophysics · Physics 2012-06-27 Simon B. Porter , William M. Grundy

Adapting to task changes without forgetting previous knowledge is a key skill for intelligent systems, and a crucial aspect of lifelong learning. Swarm controllers, however, are typically designed for specific tasks, lacking the ability to…

Neural and Evolutionary Computing · Computer Science 2025-03-25 Lorenzo Leuzzi , Simon Jones , Sabine Hauert , Davide Bacciu , Andrea Cossu