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Consider an assignment of bits to the vertices of a connected graph $G(V,E)$ with the property that the value of each vertex is a function of the values of its neighbors. A collection of such assignments is called a {\em storage code} of…

Information Theory · Computer Science 2023-03-07 Alexander Barg , Gilles Zémor

Graph, as an important data representation, is ubiquitous in many real world applications ranging from social network analysis to biology. How to correctly and effectively learn and extract information from graph is essential for a large…

Machine Learning · Computer Science 2020-10-27 Xiaodong Jiang , Ronghang Zhu , Pengsheng Ji , Sheng Li

Predictive coding is a message-passing framework initially developed to model information processing in the brain, and now also topic of research in machine learning due to some interesting properties. One of such properties is the natural…

Machine Learning · Computer Science 2022-12-12 Billy Byiringiro , Tommaso Salvatori , Thomas Lukasiewicz

Chord diagrams on circles and their intersection graphs (also known as circle graphs) have been intensively studied, and have many applications to the study of knots and knot invariants, among others. However, chord diagrams on more general…

Combinatorics · Mathematics 2007-05-23 Thomas Fleming , Blake Mellor

A storage code is an assignment of symbols to the vertices of a connected graph $G(V,E)$ with the property that the value of each vertex is a function of the values of its neighbors, or more generally, of a certain neighborhood of the…

Information Theory · Computer Science 2023-08-29 Alexander Barg , Ohad Elishco , Ryan Gabrys , Geyang Wang , Eitan Yaakobi

Determining how the brain stores information is one of the most pressing problems in neuroscience. In many instances, the collection of stimuli for a given neuron can be modeled by a convex set in $\mathbb{R}^d$. Combinatorial objects known…

Combinatorics · Mathematics 2019-05-29 R. Amzi Jeffs , Mohamed Omar , Natchanon Suaysom , Aleina Wachtel , Nora Youngs

Graph are a ubiquitous data representation, as they represent a flexible and compact representation. For instance, the 3D structure of RNA can be efficiently represented as $\textit{2.5D graphs}$, graphs whose nodes are nucleotides and…

Machine Learning · Computer Science 2021-09-21 Vincent Mallet , Carlos G. Oliver , William L. Hamilton

A fundamental problem in signal processing is to denoise a signal. While there are many well-performing methods for denoising signals defined on regular supports, such as images defined on two-dimensional grids of pixels, many important…

Signal Processing · Electrical Eng. & Systems 2023-02-20 Samuel Rey , Santiago Segarra , Reinhard Heckel , Antonio G. Marques

A neural code on $ n $ neurons is a collection of subsets of the set $ [n]=\{1,2,\dots,n\} $. In this paper, we study some properties of graphs of neural codes. In particular, we study codeword containment graph (CCG) given by Chan et al.…

Combinatorics · Mathematics 2024-03-27 Suhith K N , Neha Gupta

Distributed computation is a framework used to break down a complex computational task into smaller tasks and distributing them among computational nodes. Erasure correction codes have recently been introduced and have become a popular…

Information Theory · Computer Science 2021-08-17 Royee Yosibash , Ram Zamir

We consider data transmission over a network where each edge is an erasure channel and where the inner nodes transmit a random linear combination of their incoming information. We distinguish two channel models in this setting, the row and…

Information Theory · Computer Science 2017-10-18 Heide Gluesing-Luerssen , Anna-Lena Horlemann-Trautmann

MDS array codes are widely used in storage systems due to their computationally efficient encoding and decoding procedures. An MDS code with $r$ redundancy nodes can correct any $r$ node erasures by accessing all the remaining information…

Information Theory · Computer Science 2016-03-04 Zhiying Wang , Itzhak Tamo , Jehoshua Bruck

We prove several results about chordal graphs and weighted chordal graphs by focusing on exposed edges. These are edges that are properly contained in a single maximal complete subgraph. This leads to a characterization of chordal graphs…

Combinatorics · Mathematics 2018-08-16 Jared Culbertson , Dan P. Guralnik , Peter F. Stiller

Graph encoder embedding, a recent technique for graph data, offers speed and scalability in producing vertex-level representations from binary graphs. In this paper, we extend the applicability of this method to a general graph model, which…

Machine Learning · Statistics 2024-10-24 Cencheng Shen

Orbits of graphs under local complementation (LC) and edge local complementation (ELC) have been studied in several different contexts. For instance, there are connections between orbits of graphs and error-correcting codes. We define a new…

Combinatorics · Mathematics 2013-08-09 Lars Eirik Danielsen , Matthew G. Parker , Constanza Riera , Joakim Grahl Knudsen

In this work, we develop an efficient decoding method for graph codes, a class of stabilizer quantum error-correcting codes constructed from graph states. While optimal decoding is generally NP-hard, we propose a faster decoder exploiting…

Quantum Physics · Physics 2026-02-17 Nirupam Basak , Goutam Paul

The problem of counting occurrences of query graphs in a large data graph, known as subgraph counting, is fundamental to several domains such as genomics and social network analysis. Many important special cases (e.g. triangle counting)…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-04-05 Venkatesan T. Chakaravarthy , Michael Kapralov , Prakash Murali , Fabrizio Petrini , Xinyu Que , Yogish Sabharwal , Baruch Schieber

The problem of unsupervised learning node embeddings in graphs is one of the important directions in modern network science. In this work we propose a novel framework, which is aimed to find embeddings by \textit{discriminating…

Machine Learning · Statistics 2020-01-24 Stanislav Tsepa , Maxim Panov

Many combinatorial optimization problems can be phrased in the language of constraint satisfaction problems. We introduce a graph neural network architecture for solving such optimization problems. The architecture is generic; it works for…

Artificial Intelligence · Computer Science 2020-02-12 Jan Toenshoff , Martin Ritzert , Hinrikus Wolf , Martin Grohe

The minimum cut problem for an undirected edge-weighted graph asks us to divide its set of nodes into two blocks while minimizing the weight sum of the cut edges. In this paper, we engineer the fastest known exact algorithm for the problem.…

Data Structures and Algorithms · Computer Science 2018-08-17 Monika Henzinger , Alexander Noe , Christian Schulz
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