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The idea of adaptive walks on fitness landscapes as a means of studying evolutionary processes on large time scales is extended to fitness landscapes that are slowly changing over time. The influence of ruggedness and of the amount of…

Biological Physics · Physics 2009-10-31 Claus O. Wilke , Thomas Martinetz

In biology, a phylogenetic tree is a tool to represent the evolutionary relationship between species. Unfortunately, the classical Schr\"oder tree model is not adapted to take into account the chronology between the branching nodes. In…

Data Structures and Algorithms · Computer Science 2019-01-15 Olivier Bodini , Antoine Genitrini , Mehdi Naima

Development combines three basic processes asymmetric --- cell division, signaling and gene regulation --- in a multitude of ways to create an overwhelming diversity of multicellular life-forms. Here, we attempt to chart this diversity…

Molecular Networks · Quantitative Biology 2020-01-01 Somya Mani , Tsvi Tlusty

Multifractal properties of the distribution of topological invariants for a model of trajectories randomly entangled with a nonsymmetric lattice of obstacles are investigated. Using the equivalence of the model to random walks on a locally…

Statistical Mechanics · Physics 2009-10-31 R. Voituriez , S. Nechaev

By developing the entropy theory of random walks on equivalence relations and analyzing the asymptotic geometry of horospheric products we describe the Poisson boundary for random walks on random horospheric products of trees.

Probability · Mathematics 2012-01-04 Vadim A. Kaimanovich , Florian Sobieczky

The GREM-like trap model is a continuous time Markov jump process on the leaves of a finite volume $L$-level tree whose transition rates depend on a trapping landscape built on the vertices of the whole tree. We prove that the natural…

Probability · Mathematics 2015-01-14 Véronique Gayrard , Onur Gün

We study the properties of random walks on complex trees. We observe that the absence of loops reflects in physical observables showing large differences with respect to their looped counterparts. First, both the vertex discovery rate and…

Statistical Mechanics · Physics 2008-10-21 Andrea Baronchelli , Michele Catanzaro , Romualdo Pastor-Satorras

Diversification models describe the random growth of evolutionary trees, modeling the historical relationships of species through speciation and extinction events. One class of such models allows for independently changing traits, or types,…

Statistics Theory · Mathematics 2022-06-22 Dakota Dragomir , Elizabeth S. Allman , John A. Rhodes

Mean field theory models of percolation on networks provide analytic estimates of network robustness under node or edge removal. We introduce a new mean field theory model based on generating functions that includes information about the…

Physics and Society · Physics 2023-08-01 Chris Jones , Karoline Wiesner

In this work we investigate the dynamics of random walk processes on scale-free networks in a short to moderate time scale. We perform extensive simulations for the calculation of the mean squared displacement, the network coverage and the…

Disordered Systems and Neural Networks · Physics 2009-11-10 Lazaros K. Gallos

In this article, we study a simple random walk on a decorated Galton-Watson tree, obtained from a Galton-Watson tree by replacing each vertex of degree $n$ with an independent copy of a graph $G_n$ and gluing the inserted graphs along the…

Probability · Mathematics 2022-08-02 Eleanor Archer

In this article, we study branching random walks on graphs modeling division-mutation processes inspired by adaptive immunity. We apply the theory of expander graphs on mutation rules in evolutionary processes and obtain estimates for the…

Probability · Mathematics 2016-07-05 Irene Balelli , Vuk Milisic , Gilles Wainrib

We study the accessibility percolation model on infinite trees. The model is defined by associating an absolute continuous random variable $X_v$ to each vertex $v$ of the tree. The main question to be considered is the existence or not of…

Probability · Mathematics 2018-03-28 Cristian F. Coletti , R. J. Gava , Pablo M. Rodriguez

We introduce a new type of random walk where the definition of edge reinforcement is very different from the one in the reinforced random walk models studied so far, and investigate its basic properties, such as null/positive recurrence,…

Probability · Mathematics 2017-12-13 Janos Englander , Stanislav Volkov

We examine a system of interacting random walks with leftward drift on $\mathbb{Z}$, which begins with a single active particle at the origin and some distribution of inactive particles on the positive integers. Inactive particles become…

Probability · Mathematics 2017-07-26 Josh Rosenberg

The rotor walk on a graph is a deterministic analogue of random walk. Each vertex is equipped with a rotor, which routes the walker to the neighbouring vertices in a fixed cyclic order on successive visits. We consider rotor walk on an…

Combinatorics · Mathematics 2010-09-27 Omer Angel , Alexander E. Holroyd

We establish an exponential error term for the renewal theorem in the context of products of random matrices, which is surprising compared with classical abelian cases. A key tool is the Fourier decay of the Furstenberg measures on the…

Dynamical Systems · Mathematics 2020-04-28 Jialun Li

We present a link-by-link rule-based method for constructing all members of the ensemble of spanning trees for any recursively generated, finitely articulated graph, such as the DGM net. The recursions allow for many large-scale properties…

Physics and Society · Physics 2022-03-14 C. Tyler Diggans , Erik M. Bollt , Daniel ben-Avraham

In this paper we consider a random walk in random environment on a tree and focus on the boundary case for the underlying branching potential. We study the range $R\_n$ of this walk up to time $n$ and obtain its correct asymptotic in…

Probability · Mathematics 2016-06-24 Pierre Andreoletti , Xinxin Chen

We consider Bernoulli bond percolation on a large scale-free tree in the supercritical regime, meaning informally that there exists a giant cluster with high probability. We obtain a weak limit theorem for the sizes of the next largest…

Probability · Mathematics 2016-03-04 Jean Bertoin , Geronimo Uribe Bravo