Related papers: An Improved Integrality Gap for Steiner Tree
The corner polyhedron is described by minimal valid inequalities from maximal lattice-free convex sets. For the Relaxed Corner Polyhedron (RCP) with two free integer variables and any number of non-negative continuous variables, it is known…
Best match graphs (BMG) are a key intermediate in graph-based orthology detection and contain a large amount of information on the gene tree. We provide a near-cubic algorithm to determine whether a BMG is binary-explainable, i.e., whether…
The Hop-Constrained Steiner Tree problem (HCST) is challenging NP-hard problem arising in the design of centralized telecommunication networks where the reliability constraints matter. In this paper three iterative greedy algorithms are…
We present a coordinate ascent method for a class of semidefinite programming problems that arise in non-convex quadratic integer optimization. These semidefinite programs are characterized by a small total number of active constraints and…
The rooted subtree prune and regraft (rSPR) distance between two rooted binary phylogenetic trees is a well-studied measure of topological dissimilarity that is NP-hard to compute. Here we describe an improved linear kernel for the problem.…
Clustering is a well-known and studied problem, one of its variants, called contiguity-constrained clustering, accepts as a second input a graph used to encode prior information about cluster structure by means of contiguity constraints…
In this work we propose a batch version of the Greenkhorn algorithm for multimarginal regularized optimal transport problems. Our framework is general enough to cover, as particular cases, some existing algorithms like Sinkhorn and…
We describe a technique to reorganize topologies of Steiner trees by exchanging neighbors of adjacent Steiner points. We explain how to use the systematic way of building trees, and therefore topologies, to find the correct topology after…
The importance of an adequate inner loop starting point (as opposed to a sufficient inner loop stopping rule) is discussed in the context of a numerical optimization algorithm consisting of nested primal-dual proximal-gradient iterations.…
The treewidth is a structural parameter that measures the tree-likeness of a graph. Many algorithmic and combinatorial results are expressed in terms of the treewidth. In this paper, we study the treewidth of outer $k$-planar graphs, that…
Given two sets of points in the plane, $P$ of $n$ terminals and $S$ of $m$ Steiner points, a Steiner tree of $P$ is a tree spanning all points of $P$ and some (or none or all) points of $S$. A Steiner tree with length of longest edge…
We show that for some $\epsilon > 10^{-36}$ and any metric TSP instance, the max entropy algorithm returns a solution of expected cost at most $\frac{3}{2}-\epsilon$ times the cost of the optimal solution to the subtour elimination LP. This…
We obtain polynomial-time approximation-preserving reductions (up to a factor of 1 + \epsilon) from the prize-collecting Steiner tree and prize-collecting Steiner forest problems in planar graphs to the corresponding problems in graphs of…
Preconditioned gradient iterations for very large eigenvalue problems are efficient solvers with growing popularity. However, only for the simplest preconditioned eigensolver, namely the preconditioned gradient iteration (or preconditioned…
Given an edge-weighted graph and a set of known seed vertices, a network scientist often desires to understand the graph relationships to explain connections between the seed vertices. When the seed set is 3 or larger Steiner minimal tree -…
In this paper we reassess the parameterized complexity and approximability of the well-studied Steiner Forest problem in several graph classes of bounded width. The problem takes an edge-weighted graph and pairs of vertices as input, and…
In this paper we study the Steiner tree problem over a dynamic set of terminals. We consider the model where we are given an $n$-vertex graph $G=(V,E,w)$ with positive real edge weights, and our goal is to maintain a tree which is a good…
This paper develops new semidefinite programming (SDP) relaxation techniques for two classes of mixed binary quadratically constrained quadratic programs (MBQCQP) and analyzes their approximation performance. The first class of problem…
The problem of {\em efficiently} finding the best match for a query in a given set with respect to the Euclidean distance or the cosine similarity has been extensively studied in literature. However, a closely related problem of efficiently…
Steiner Tree Packing (STP) is a notoriously hard problem in classical complexity theory, which is of practical relevance to VLSI circuit design. Previous research has approached this problem by providing heuristic or approximate algorithms.…