Related papers: Packing tree degree sequences
We study a classic problem introduced thirty years ago by Eades and Wormald. Let $G=(V,E,\lambda)$ be a weighted planar graph, where $\lambda: E \rightarrow \mathbb{R}^+$ is a length function. The Fixed Edge-Length Planar Realization…
Let $T$ be a tree with $t$ edges. We show that the number of isomorphic (labeled) copies of $T$ in a graph $G = (V,E)$ of minimum degree at least $t$ is at least \[2|E| \prod_{v \in V} (d(v) - t + 1)^{\frac{(t-1)d(v)}{2|E|}}.\]…
In this note we analyze the performance of a simple root-finding algorithm in uniform attachment trees. The leaf-stripping algorithm recursively removes all leaves of the tree for a carefully chosen number of rounds. We show that, with…
Higher-dimensional orthogonal packing problems have a wide range of practical applications, including packing, cutting, and scheduling. Combining the use of our data structure for characterizing feasible packings with our new classes of…
The cellular tree classifier model addresses a fundamental problem in the design of classifiers for a parallel or distributed computing world: Given a data set, is it sufficient to apply a majority rule for classification, or shall one…
Decision trees and random forest remain highly competitive for classification on medium-sized, standard datasets due to their robustness, minimal preprocessing requirements, and interpretability. However, a single tree suffers from high…
We find an asymptotic enumeration formula for the number of simple $r$-uniform hypergraphs with a given degree sequence, when the number of edges is sufficiently large. The formula is given in terms of the solution of a system of equations.…
Let $G=(V,E)$ and $H$ be two graphs. Packing problem is to find in $G$ the largest number of independent subgraphs each of which is isomorphic to $H$. Let $U\subset{V}$. If the graph $G-U$ has no subgraph isomorphic to $H$, $U$ is a cover…
Phylogenetic trees and networks are leaf-labelled graphs that are used to describe evolutionary histories of species. The Tree Containment problem asks whether a given phylogenetic tree is embedded in a given phylogenetic network. Given a…
Background: Tree reconciliation problems have long been studied in phylogenetics. A particular variant of the reconciliation problem for a gene tree T and a species tree S assumes that for each interior vertex x of T it is known whether x…
We give exact values and bounds on the isoperimetric peak of complete trees, improving on known results. For the complete $q$-ary tree of depth $d$, if $q\ge 5$, then we find that the isoperimetric peak equals $d$, completing an open…
Suppose $G$ is a tree. Graham's "Tree Reconstruction Conjecture" states that $G$ is uniquely determined by the integer sequence $|G|$, $|L(G)|$, $|L(L(G))|$, $|L(L(L(G)))|$, $\ldots$, where $L(H)$ denotes the line graph of the graph $H$.…
It is well-known that the Vertex Cover problem is in P on bipartite graphs, however; the computational complexity of the Partial Vertex Cover problem on bipartite graphs is open. In this paper, we first show that the Partial Vertex Cover…
Reconstruction of evolutionary relationships between species is an important topic in the field of computational biology. Pairwise compatibility graphs (PCGs) are used to model such relationships. A graph is a PCG if its edges can be…
Counting the number of spanning trees in specific classes of graphs has attracted increasing attention in recent years. In this note, we present unified proofs and generalizations of several results obtained in the 2020s. The main method is…
We study the fundamental question of how likely it is that two randomly chosen trees are isomorphic to each other for different models of random trees. We show that the probability decays exponentially for rooted labeled trees as well as…
Two plane drawings of graphs on the same set of points are called disjoint compatible if their union is plane and they do not have an edge in common. Let $S$ be a convex point set of $2n \geq 10$ points and let $\mathcal{H}$ be a family of…
Here we show that deciding whether two rooted binary phylogenetic trees on the same set of taxa permit a cherry-picking sequence, a special type of elimination order on the taxa, is NP-complete. This improves on an earlier result which…
We introduce a new model of random tree that grows like a random recursive tree, except at some exceptional "doubling events" when the tree is replaced by two copies of itself attached to a new root. We prove asymptotic results for the size…
Tree-decompositions and treewidth are of fundamental importance in structural and algorithmic graph theory. The "spread" of a tree-decomposition is the minimum integer $s$ such that every vertex lies in at most $s$ bags. A…