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Neuroblastoma is a strongly heterogeneous cancer with very diverse clinical courses that may vary from spontaneous regression to fatal progression; an accurate patient's risk estimation at diagnosis is essential to design appropriate tumor…

Quantitative Methods · Quantitative Biology 2018-02-23 Valerio Maggio , Marco Chierici , Giuseppe Jurman , Cesare Furlanello

Machine-learned potentials (MLPs) trained on ab initio data combine the computational efficiency of classical interatomic potentials with the accuracy and generality of the first-principles method used in the creation of the respective…

Chemical Physics · Physics 2024-08-07 Leonid Kahle , Benoit Minisini , Tai Bui , Jeremy T. First , Corneliu Buda , Thomas Goldman , Erich Wimmer

Purpose: This study presents a Deep Learning (DL)-based quality assessment (QA) approach for evaluating auto-generated contours (auto-contours) in radiotherapy, with emphasis on Online Adaptive Radiotherapy (OART). Leveraging Bayesian…

Computer Vision and Pattern Recognition · Computer Science 2025-05-13 Biling Wang , Austen Maniscalco , Ti Bai , Siqiu Wang , Michael Dohopolski , Mu-Han Lin , Chenyang Shen , Dan Nguyen , Junzhou Huang , Steve Jiang , Xinlei Wang

Data poisoning attacks compromise the integrity of machine-learning models by introducing malicious training samples to influence the results during test time. In this work, we investigate backdoor data poisoning attack on deep neural…

Machine Learning · Computer Science 2019-12-04 Mahesh Subedar , Nilesh Ahuja , Ranganath Krishnan , Ibrahima J. Ndiour , Omesh Tickoo

Properties of molecules are indicative of their functions and thus are useful in many applications. With the advances of deep learning methods, computational approaches for predicting molecular properties are gaining increasing momentum.…

Quantitative Methods · Quantitative Biology 2021-07-07 Zhengyang Wang , Meng Liu , Youzhi Luo , Zhao Xu , Yaochen Xie , Limei Wang , Lei Cai , Qi Qi , Zhuoning Yuan , Tianbao Yang , Shuiwang Ji

Direction finding and positioning systems based on RF signals are significantly impacted by multipath propagation, particularly in indoor environments. Existing algorithms (e.g MUSIC) perform poorly in resolving Angle of Arrival (AoA) in…

Signal Processing · Electrical Eng. & Systems 2021-12-13 Zhuangzhuang Dai , Yuhang He , Tran Vu , Niki Trigoni , Andrew Markham

Deep learning has the potential to revolutionize quantum chemistry as it is ideally suited to learn representations for structured data and speed up the exploration of chemical space. While convolutional neural networks have proven to be…

This study proposes an Artificial Intelligence (AI) driven methodology for predicting a combination of brazed ceramic-metal composite materials. Multiple machine learning (ML) algorithms are compared with the deep learning (DL) model. The…

Applied Physics · Physics 2025-10-14 Sunita Khod , Vinay Kamma , Ravi Kumar Verma , Mayank Goswami

Many existing deep learning models are vulnerable to adversarial examples that are imperceptible to humans. To address this issue, various methods have been proposed to design network architectures that are robust to one particular type of…

Machine Learning · Computer Science 2021-01-19 Jia Liu , Yaochu Jin

Robustness of Deep Neural Networks (DNNs) is an important aspect to consider for their clinical applications. This work examined robustness issue for a DNN-based multi-class classification model via comprehensive experimental and simulation…

Medical Physics · Physics 2023-03-07 Yuting Peng , Chenyang Shen , Yesenia Gonzalez , Yin Gao , Xun Jia

Deep learning is a potential approach to automatically develop kinetic models from experimental data. We propose a deep neural network model of KiNet to represent chemical kinetics. KiNet takes the current composition states and predicts…

Computational Physics · Physics 2021-08-03 Weiqi Ji , Sili Deng

Recent advances in machine learning have demonstrated an enormous utility of deep learning approaches, particularly Graph Neural Networks (GNNs) for materials science. These methods have emerged as powerful tools for high-throughput…

Computational Physics · Physics 2025-05-23 Junchi Liu , Ying Tang , Sergei Tretiak , Wenhui Duan , Liujiang Zhou

Recent works have shown that exploiting multi-scale representations deeply learned via convolutional neural networks (CNN) is of tremendous importance for accurate contour detection. This paper presents a novel approach for predicting…

Computer Vision and Pattern Recognition · Computer Science 2018-01-03 Dan Xu , Wanli Ouyang , Xavier Alameda-Pineda , Elisa Ricci , Xiaogang Wang , Nicu Sebe

Geometric deep learning models, which incorporate the relevant molecular symmetries within the neural network architecture, have considerably improved the accuracy and data efficiency of predictions of molecular properties. Building on this…

This study conducts a Quantitative Structure Property Relationship (QSPR) analysis to explore the correlation between the physical properties of drug molecules and their topological indices using machine learning techniques. While prior…

Biomolecules · Quantitative Biology 2025-05-14 M. J. Nadjafi Arani , S. Sorgun , M. Mirzargar

Olfactory perception plays a critical role in both human and organismal interactions, yet understanding of its underlying mechanisms and influencing factors remain insufficient. Molecular structures influence odor perception through…

Machine Learning · Computer Science 2025-02-04 HongXin Xie , JianDe Sun , Yi Shao , Shuai Li , Sujuan Hou , YuLong Sun , Jian Wang

We introduce the elEmBERT model for chemical classification tasks. It is based on deep learning techniques, such as a multilayer encoder architecture. We demonstrate the opportunities offered by our approach on sets of organic, inorganic…

Chemical Physics · Physics 2024-08-20 Shokirbek Shermukhamedov , Dilorom Mamurjonova , Michael Probst

We report an interpretation method for deep learning models that allows us to handle high-dimensional spectral data in materials science. The proposed method uses feature extraction and clustering analysis to categorize materials into…

Materials Science · Physics 2025-10-21 Akira Takahashi , Yu Kumagai , Arata Takamatsu , Fumiyasu Oba

In this work, we investigate the value of employing deep learning for the task of wireless signal modulation recognition. Recently in [1], a framework has been introduced by generating a dataset using GNU radio that mimics the imperfections…

Machine Learning · Computer Science 2018-01-08 Xiaoyu Liu , Diyu Yang , Aly El Gamal

Predicting quantum chemical properties is a fundamental challenge for computational chemistry. While the development of graph neural networks has advanced molecular representation learning and property prediction, their performance could be…

Quantitative Methods · Quantitative Biology 2023-10-10 Rong Zhang , Rongqing Yuan , Boxue Tian
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