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Graph embeddings have emerged as a powerful tool for representing complex network structures in a low-dimensional space, enabling the use of efficient methods that employ the metric structure in the embedding space as a proxy for the…

Social and Information Networks · Computer Science 2024-04-18 Radosław Nowak , Adam Małkowski , Daniel Cieślak , Piotr Sokół , Paweł Wawrzyński

We study the problem of graph structure identification, i.e., of recovering the graph of dependencies among time series. We model these time series data as components of the state of linear stochastic networked dynamical systems. We assume…

Machine Learning · Computer Science 2023-06-29 Sérgio Machado , Anirudh Sridhar , Paulo Gil , Jorge Henriques , José M. F. Moura , Augusto Santos

Graphlets are subgraphs rooted at a fixed vertex. The number of occurrences of graphlets aligned to a particular vertex, called graphlet degree sequence (gds), gives a topological description of the surrounding of the analyzed vertex.…

Combinatorics · Mathematics 2026-01-01 David Hartman , Aneta Pokorná , Daniel Trlifaj , Lluís Vena

A metric graph is a 1-dimensional stratified metric space consisting of vertices and edges or loops glued together. Metric graphs can be naturally used to represent and model data that take the form of noisy filamentary structures, such as…

Statistics Theory · Mathematics 2014-02-10 Fabrizio Lecci , Alessandro Rinaldo , Larry Wasserman

We consider the problem of embedding the nodes of a hypergraph into Euclidean space under the assumption that the interactions arose through closeness to unknown hyperedge centres. In this way, we tackle the inverse problem associated with…

Social and Information Networks · Computer Science 2025-09-11 Francesco Zigliotto , Desmond J. Higham

Complex systems, ranging from soft materials to wireless communication, are often organised as random geometric networks in which nodes and edges evenly fill up the volume of some space. Studying such networks is difficult because they…

Probability · Mathematics 2022-07-19 Ivan Kryven , Rik Versendaal

In this paper, we consider the problem of reconstructing a directed graph using path queries. In this query model of learning, a graph is hidden from the learner, and the learner can access information about it with path queries. For a…

Data Structures and Algorithms · Computer Science 2021-03-17 Mano Vikash Janardhanan , Lev Reyzin

Given an underlying undirected simple graph, we consider the set of all acyclic orientations of its edges. Each of these orientations induces a partial order on the vertices of our graph and, therefore, we can count the number of linear…

Combinatorics · Mathematics 2015-02-17 Benjamin Iriarte Giraldo

Sparse recovery can recover sparse signals from a set of underdetermined linear measurements. Motivated by the need to monitor large-scale networks from a limited number of measurements, this paper addresses the problem of recovering sparse…

Information Theory · Computer Science 2015-03-20 Meng Wang , Weiyu Xu , Enrique Mallada , Ao Tang

The graph-navigability problem concerns how one can find as short paths as possible between a pair of vertices, given an incomplete picture of a graph. We study the navigability of graphs where the vertices are tagged by a number (between 1…

Physics and Society · Physics 2011-08-25 Sang Hoon Lee , Petter Holme

Graphs are often used to organize data because of their simple topological structure, and therefore play a key role in machine learning. And it turns out that the low-dimensional embedded representation obtained by graph representation…

Machine Learning · Computer Science 2021-01-05 Xing Li , Wei Wei , Xiangnan Feng , Zhiming Zheng

Graph embedding based on random-walks supports effective solutions for many graph-related downstream tasks. However, the abundance of embedding literature has made it increasingly difficult to compare existing methods and to identify…

Machine Learning · Computer Science 2021-10-26 Zexi Huang , Arlei Silva , Ambuj Singh

Graphs are used in many disciplines to model the relationships that exist between objects in a complex discrete system. Researchers may wish to compare a network of interest to a "typical" graph from a family (or ensemble) of graphs which…

Combinatorics · Mathematics 2025-08-08 Catherine Greenhill

We present Graph Random Neural Features (GRNF), a novel embedding method from graph-structured data to real vectors based on a family of graph neural networks. The embedding naturally deals with graph isomorphism and preserves the metric…

Machine Learning · Computer Science 2020-06-03 Daniele Zambon , Cesare Alippi , Lorenzo Livi

We consider an inverse problem in information diffusion modeled by random walks on combinatorial graphs. The problem concerns reconstruction of vertex centrality from the distribution of the first passage times observed on a subset of…

Mathematical Physics · Physics 2026-03-24 Yixian Gao , Songshuo Li , Yang Yang

Node embeddings map graph vertices into low-dimensional Euclidean spaces while preserving structural information. They are central to tasks such as node classification, link prediction, and signal reconstruction. A key goal is to design…

Machine Learning · Computer Science 2026-02-18 Valentin de Bassompierre , Jean-Charles Delvenne , Laurent Jacques

We discuss the problem of embedding graphs in the plane with restrictions on the vertex mapping. In particular, we introduce a technique for drawing planar graphs with a fixed vertex mapping that bounds the number of times edges bend. An…

Computational Geometry · Computer Science 2012-06-05 Taylor Gordon

We propose a novel approach for learning node representations in directed graphs, which maintains separate views or embedding spaces for the two distinct node roles induced by the directionality of the edges. We argue that the previous…

Social and Information Networks · Computer Science 2019-07-01 Megha Khosla , Jurek Leonhardt , Wolfgang Nejdl , Avishek Anand

Consider a random graph process where vertices are chosen from the interval $[0,1]$, and edges are chosen independently at random, but so that, for a given vertex $x$, the probability that there is an edge to a vertex $y$ decreases as the…

Recently, one has seen a surge of interest in developing such methods including ones for learning such representations for (undirected) graphs (while preserving important properties). However, most of the work to date on embedding graphs…

Social and Information Networks · Computer Science 2018-11-30 Jiankai Sun , Srinivasan Parthasarathy