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Generating value from data requires the ability to find, access and make sense of datasets. There are many efforts underway to encourage data sharing and reuse, from scientific publishers asking authors to submit data alongside manuscripts…

Calls to use open generative language models in academic research have highlighted the need for reproducibility and transparency in scientific research. However, the impact of generative AI extends well beyond academia, as corporations and…

Human-Computer Interaction · Computer Science 2024-08-06 Robert Wolfe , Tanushree Mitra

Deep learning (DL) techniques have gained significant popularity among software engineering (SE) researchers in recent years. This is because they can often solve many SE challenges without enormous manual feature engineering effort and…

Software Engineering · Computer Science 2024-12-10 Chao Liu , Cuiyun Gao , Xin Xia , David Lo , John Grundy , Xiaohu Yang

One of the foundations of science is that researchers must publish the methodology used to achieve their results so that others can attempt to reproduce them. This has the added benefit of allowing methods to be adopted and adapted for…

Databases · Computer Science 2014-06-05 Paolo Missier , Simon Woodman , Hugo Hiden , Paul Watson

Although a standard in natural science, reproducibility has been only episodically applied in experimental computer science. Scientific papers often present a large number of tables, plots and pictures that summarize the obtained results,…

Digital Libraries · Computer Science 2017-09-06 Fernando Chirigati , Rebecca Capone , Dennis Shasha , Remi Rampin , Juliana Freire

The FAIR (Findable, Accessible, Interoperable, and Reusable) data principles [1] promote the interoperability of scientific data by encouraging the use of persistent identifiers, standardized vocabularies, and formal metadata structures.…

Considerable scientific work involves locating, analyzing, systematizing, and synthesizing other publications. Its results end up in a paper's "background" section or in standalone articles, which include meta-analyses and systematic…

Digital Libraries · Computer Science 2023-12-05 Diomidis Spinellis

While the open-source software development model has led to successful large-scale collaborations in building software systems, data science projects are frequently developed by individuals or small teams. We describe challenges to scaling…

Machine Learning · Computer Science 2021-10-26 Micah J. Smith , Jürgen Cito , Kelvin Lu , Kalyan Veeramachaneni

Contemporary debates on "open science" mostly focus on the pub- lic accessibility of the products of scientific and academic work. In contrast, this paper presents arguments for "opening" the ongoing work of science. That is, this paper is…

Physics Education · Physics 2017-02-17 Pratim Sengupta , Marie-Claire Shanahan

To reproduce eScience, several challenges need to be solved: scientific workflows need to be automated; the involved software versions need to be provided in an unambiguous way; input data needs to be easily accessible; High-Performance…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-01-30 Kessy Abarenkov , Anne Fouilloux , Helmut Neukirchen , Abdulrahman Azab

As the computational requirements for machine learning systems and the size and complexity of machine learning frameworks increases, essential framework innovation has become challenging. While computational needs have driven recent…

Freely and openly shared low-cost electronic applications, known as open electronics, have sparked a new open-source movement, with much un-tapped potential to advance scientific research. Initially designed to appeal to electronic…

Quantitative Methods · Quantitative Biology 2022-07-14 Michael Oellermann , Jolle W. Jolles , Diego Ortiz , Rui Seabra , Tobias Wenzel , Hannah Wilson , Richelle Tanner

This paper investigates the reproducibility of computational science research and identifies key challenges facing the community today. It is the result of the First Summer School on Experimental Methodology in Computational Science…

There has been increasing concern within the machine learning community that we are in a reproducibility crisis. As many have begun to work on this problem, all work we are aware of treat the issue of reproducibility as an intrinsic binary…

Machine Learning · Statistics 2020-12-21 Edward Raff

SMART is an open source web application designed to help data scientists and research teams efficiently build labeled training data sets for supervised machine learning tasks. SMART provides users with an intuitive interface for creating…

Machine Learning · Statistics 2023-06-26 Rob Chew , Michael Wenger , Caroline Kery , Jason Nance , Keith Richards , Emily Hadley , Peter Baumgartner

Data Science research is undergoing a revolution fueled by the transformative power of technology, the Internet, and an ever increasing computational capacity. The rate at which sophisticated algorithms can be developed is unprecedented,…

Data makes science possible. Sharing data improves visibility, and makes the research process transparent. This increases trust in the work, and allows for independent reproduction of results. However, a large proportion of data from…

Digital Libraries · Computer Science 2020-02-27 Nicholas J Tierney , Karthik Ram

Numerous metascience studies and other initiatives have begun to monitor the prevalence of open science practices when it is more important to understand the 'downstream' effects or impacts of open science. PLOS and DataSeer have developed…

Digital Libraries · Computer Science 2026-05-01 Lauren Cadwallader , Iain Hrynaszkiewicz , parth sarin , Tim Vines

With the development of deep learning (DL) techniques, rotating machinery intelligent diagnosis has gone through tremendous progress with verified success and the classification accuracies of many DL-based intelligent diagnosis algorithms…

Signal Processing · Electrical Eng. & Systems 2020-08-20 Zhibin Zhao , Tianfu Li , Jingyao Wu , Chuang Sun , Shibin Wang , Ruqiang Yan , Xuefeng Chen