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Macroevolution is considered as a problem of stochastic dynamics in a system with many competing agents. Evolutionary events (speciations and extinctions) are triggered by fitness records found by random exploration of the agents' fitness…

adap-org · Physics 2017-01-11 Paolo Sibani , Michael Brandt , Preben Alstroem

We describe a continuous-time modelling framework for biological population dynamics that accounts for demographic noise. In the spirit of the methodology used by statistical physicists, transitions between the states of the system are…

Populations and Evolution · Quantitative Biology 2018-07-19 George W. A. Constable , Alan J. McKane

Understanding the statistical properties of a collection of individuals subject to random displacements and birth-and-death events is key to several applications in physics and life sciences, encompassing the diagnostic of nuclear reactors…

Statistical Mechanics · Physics 2022-06-22 Théophile Bonnet , Davide Mancusi , Andrea Zoia

The environment in which a population evolves can have a crucial impact on selection. We study evolutionary dynamics in finite populations of fixed size in a changing environment. The population dynamics are driven by birth and death…

Populations and Evolution · Quantitative Biology 2014-09-01 Peter Ashcroft , Philipp M Altrock , Tobias Galla

The question of whether biological populations survive or are eventually driven to extinction has long been examined using mathematical models. In this work we study population survival or extinction using a stochastic, discrete…

Populations and Evolution · Quantitative Biology 2021-09-15 Yifei Li , Stuart T. Johnston , Pascal R. Buenzli , Peter van Heijster , Matthew J. Simpson

We describe a simple model of evolution which incorporates the branching and extinction of species lines, and also includes abiotic influences. A first principles approach is taken in which the probability for speciation and extinction are…

adap-org · Physics 2008-02-03 D. A. Head , G. J. Rodgers

Temporal environmental noise (EN) is a prevalent natural phenomenon that controls population and community dynamics, shaping the destiny of biological species and genetic types. Conventional theoretical models often depict EN as a Markovian…

Populations and Evolution · Quantitative Biology 2023-11-16 Immanuel Meyer , Ami Taitelbaum , Michael Assaf , Nadav M. Shnerb

A fundamental problem in the fields of population genetics, evolution, and community ecology, is the fate of a single mutant, or invader, introduced in a finite population of wild types. For a fixed-size community of $N$ individuals, with…

Populations and Evolution · Quantitative Biology 2017-10-25 Matan Danino , Nadav M. Shnerb

Neutral dynamics, where taxa are assumed to be demographically equivalent and their abundance is governed solely by the stochasticity of the underlying birth-death process, has proved itself as an important minimal model that accounts for…

Populations and Evolution · Quantitative Biology 2015-09-09 David Kessler , Samir Suweis , Marco Formentin , Nadav M. Shnerb

Living species, ranging from bacteria to animals, exist in environmental conditions that exhibit spatial and temporal heterogeneity which requires them to adapt. Risk-spreading through spontaneous phenotypic variations is a known concept in…

Populations and Evolution · Quantitative Biology 2020-04-03 Aleksandra Ardaševa , Robert A. Gatenby , Alexander R. A. Anderson , Helen M. Byrne , Philip K. Maini , Tommaso Lorenzi

Twenty years ago, after analysing palaeontological data, Raup and Sepkoski suggested that mass extinctions on Earth appear cyclically in time with a period of approximately 26 million years (My). To explain the 26My period, a number of…

Populations and Evolution · Quantitative Biology 2007-05-23 Adam Lipowski , Dorota Lipowska

Strong positive feedback is considered a necessary condition to observe abrupt shifts of ecosystems. A few previous studies have shown that demographic noise -- arising from the probabilistic and discrete nature of birth and death processes…

Populations and Evolution · Quantitative Biology 2021-06-22 Sabiha Majumder , Ayan Das , Appilineni Kushal , Sumithra Sankaran , Vishwesha Guttal

Established populations often exhibit oscillations in their sizes. If a population is isolated, intrinsic stochasticity of elemental processes can ultimately bring it to extinction. Here we study extinction of oscillating populations in a…

Statistical Mechanics · Physics 2016-03-23 Naftali R. Smith , Baruch Meerson

A biologically motivated model for spatio-temporal coexistence of two competing species is studied by mean-field theory and numerical simulations. In d>1 dimensions the phase diagram displays an extended region where both species coexist,…

Statistical Mechanics · Physics 2007-05-23 Heiko Reinhardt , Frank Boehm , Barbara Drossel , Haye Hinrichsen

In this paper, the extinction problem for a class of distylous plant populations is considered within the framework of certain nonhomogeneous nearest-neighbor random walks in the positive quadrant. For the latter, extinction means…

Probability · Mathematics 2019-11-07 Gerold Alsmeyer , Kilian Raschel

Environmental fluctuations can create population-depleted areas and even extinct areas for the population. This effect is more severe in the presence of the Allee effect (decreasing growth rate at low population densities). Dispersal inside…

Populations and Evolution · Quantitative Biology 2022-02-23 Rodrigo Crespo-Miguel , Javier Jarillo , Francisco J. Cao-García

We study the biodiversity problem for resource competition systems with extinctions and self-limitation effects. Our main result establishes estimates of biodiversity in terms of the fundamental parameters of the model. We also prove the…

Dynamical Systems · Mathematics 2018-09-12 Vladimir Kozlov , Sergey Vakulenko , Uno Wennergren , Vladimir G. Tkachev

In this paper we study the critical properties of the non-equilibrium phase transition of the Susceptible-Exposed-Infected model under the effects of long-range correlated time-varying environmental noise on the Bethe lattice. We show that…

Statistical Mechanics · Physics 2021-01-20 Alexander H. O. Wada , José A. Hoyos

We present a study of the influence of different types of disorder on systems in the Ising universality class by employing both a dynamical field theory approach and extensive Monte Carlo simulations. We reproduce some well known results…

Condensed Matter · Physics 2009-10-31 Juan J. Alonso , Miguel A. Munoz

The influence of migration on the stochastic dynamics of subdivided populations is still an open issue in various evolutionary models. We develop here a self-consistent mean-field-like method in order to determine the effects of migration…

Statistical Mechanics · Physics 2014-04-10 Pierangelo Lombardo , Andrea Gambassi , Luca Dall'Asta