Related papers: Synchronization Strings: Codes for Insertions and …
Locally Decodable Codes (LDCs) are error-correcting codes $C:\Sigma^n\rightarrow \Sigma^m$ with super-fast decoding algorithms. They are important mathematical objects in many areas of theoretical computer science, yet the best…
We consider the problem of coding for the substring channel, in which information strings are observed only through their (multisets of) substrings. Due to existing DNA sequencing techniques and applications in DNA-based storage systems,…
Longest Common Substring (LCS) is an important text processing problem, which has recently been investigated in the quantum query model. The decisional version of this problem, LCS with threshold $d$, asks whether two length-$n$ input…
DNA storage has emerged as a promising solution for large-scale and long-term data preservation. Among various error types, insertions are the most frequent errors occurring in DNA sequences, where the inserted symbol is often identical or…
Encoding data as a set of unordered strings is receiving great attention as it captures one of the basic features of DNA storage systems. However, the challenge of constructing optimal redundancy codes for this channel remained elusive. In…
Reliability is an important requirement for both communication and storage systems. Due to continuous scale down of technology multiple adjacent bits error probability increases. The data may be corrupted due soft errors. Error correction…
There is increasing realization in neuroscience that information is represented in the brain, e.g., neocortex, hippocampus, in the form sparse distributed codes (SDCs), a kind of cell assembly. Two essential questions are: a) how are such…
We introduce the concept of an \ff-maximal error-detecting block code, for some parameter \ff{} between 0 and 1, in order to formalize the situation where a block code is close to maximal with respect to being error-detecting. Our…
In this paper, we provide a performance analysis of a new class of serial concatenated convolutional codes (SCCC) where the inner encoder can be punctured beyond the unitary rate. The puncturing of the inner encoder is not limited to inner…
Consider two random strings having the same length and generated by an iid sequence taking its values uniformly in a fixed finite alphabet. Artificially place a long constant block into one of the strings, where a constant block is a…
Function-Correcting Codes (FCCs) enable reliable computation of a function of a $k$-bit message over noisy channels without requiring full message recovery. In this work, we study optimal single-error correcting FCCs (SEFCCs) for…
Locally Decodable Codes (LDCs) are error correcting codes which permit the recovery of any single message symbol with a low number of queries to the codeword (the locality). Traditional LDC tradeoffs between the rate, locality, and error…
The problem of error correction in both coherent and noncoherent network coding is considered under an adversarial model. For coherent network coding, where knowledge of the network topology and network code is assumed at the source and…
The design of block codes for short information blocks (e.g., a thousand or less information bits) is an open research problem that is gaining relevance thanks to emerging applications in wireless communication networks. In this paper, we…
Physical-layer Network Coding (PNC) makes use of the additive nature of the electromagnetic (EM) waves to apply network coding arithmetic at the physical layer. With PNC,the destructive effect of interference in wireless networks is…
Labeling of DNA molecules is a fundamental technique for DNA visualization and analysis. This process was mathematically modeled in [1], where the received sequence indicates the positions of the used labels. In this work, we develop error…
In magnetic-recording systems, consecutive sections experience different signal to noise ratios (SNRs). To perform error correction over these systems, one approach is to use an individual block code for each section. However, the…
Large pre-trained language models have been used to generate code,providing a flexible interface for synthesizing programs from natural language specifications. However, they often violate syntactic and semantic rules of their output…
Given a pair of strings, the problems of computing their Longest Common Subsequence and Edit Distance have been extensively studied for decades. For exact algorithms, LCS and Edit Distance (with character insertions and deletions) are…
The subblock energy-constrained codes (SECCs) and sliding window-constrained codes (SWCCs) have recently attracted attention due to various applications in communcation systems such as simultaneous energy and information transfer. In a…