Related papers: Symmetric motifs in random geometric graphs
Given a Poisson process on a bounded interval, its random geometric graph is the graph whose vertices are the points of the Poisson process and edges exist between two points if and only if their distance is less than a fixed given…
Symmetries are ubiquitous in real networks and often characterize network features and functions. Here we present a generalization of network symmetry called \emph{latent symmetry}, which is an extension of the standard notion of symmetry.…
In a random graph, counts for the number of vertices with given degrees will typically be dependent. We show via a multivariate normal and a Poisson process approximation that, for graphs which have independent edges, with a possibly…
We consider the problem of determining the proportion of edges that are discovered in an Erdos-Renyi graph when one constructs all shortest paths from a given source node to all other nodes. This problem is equivalent to the one of…
The structure of the network can be described by motifs, which are subgraphs that often repeat themselves. In order to understand the structure of network motifs, it is of great importance to study subgraphs from the perspective of…
We propose a consistent approach to the statistics of the shortest paths in random graphs with a given degree distribution. This approach goes further than a usual tree ansatz and rigorously accounts for loops in a network. We calculate the…
The identification of motifs--subgraphs that appear significantly more often in a particular network than in an ensemble of randomized networks--has become a ubiquitous method for uncovering potentially important subunits within networks…
Graphs are used in many disciplines to model the relationships that exist between objects in a complex discrete system. Researchers may wish to compare a network of interest to a "typical" graph from a family (or ensemble) of graphs which…
When studying networks using random graph models, one is sometimes faced with situations where the notion of adjacency between nodes reflects multiple constraints. Traditional random graph models are insufficient to handle such situations.…
Metric graphs are meaningful objects for modeling complex structures that arise in many real-world applications, such as road networks, river systems, earthquake faults, blood vessels, and filamentary structures in galaxies. To study metric…
We introduce a natural generalization of the Erd\H{o}s-R\'enyi random graph model in which random instances of a fixed motif are added independently. The binomial random motif graph $G(H,n,p)$ is the random (multi)graph obtained by adding…
A Shared Nearest Neighbor (SNN) graph is a type of graph construction using shared nearest neighbor information, which is a secondary similarity measure based on the rankings induced by a primary $k$-nearest neighbor ($k$-NN) measure. SNN…
Interacting particles on graphs are routinely used to study magnetic behaviour in physics, disease spread in epidemiology, and opinion dynamics in social sciences. The literature on mean-field approximations of such systems for large graphs…
Visibility algorithms transform time series into graphs and encode dynamical information in their topology, paving the way for graph-theoretical time series analysis as well as building a bridge between nonlinear dynamics and network…
In this paper, we develop efficient exact and approximate algorithms for computing a maximum independent set in random graphs. In a random graph $G$, each pair of vertices are joined by an edge with a probability $p$, where $p$ is a…
One of the most important concepts in biological network analysis is that of network motifs, which are patterns of interconnections that occur in a given network at a frequency higher than expected in a random network. In this work we are…
In this paper we address the problem of understanding the success of algorithms that organize patches according to graph-based metrics. Algorithms that analyze patches extracted from images or time series have led to state-of-the art…
Suppose that there is a family of $n$ random points $X_v$ for $v \in V$, independently and uniformly distributed in the square $\left[-\sqrt{n}/2,\sqrt{n}/2\right]^2$ of area $n$. We do not see these points, but learn about them in one of…
Turing patterns, arising from the interplay between competing species of diffusive particles, has long been an important concept for describing non-equilibrium self-organization in nature, and has been extensively investigated in many…
We perform an extensive investigation of the localization properties of the eigenmodes of the Laplace and adjacency matrix for one-dimensional random geometric graphs. We evaluate the density of states, the probability distribution of the…