Related papers: Learning and inference in knowledge-based probabil…
Machine learning methods can detect complex relationships between variables, but usually do not exploit domain knowledge. This is a limitation because in many scientific disciplines, such as systems biology, domain knowledge is available in…
This paper addresses the challenges posed by the unstructured nature and high-dimensional semantic complexity of electronic health record texts. A deep learning method based on attention mechanisms is proposed to achieve unified modeling…
Clinical predictions using clinical data by computational methods are common in bioinformatics. However, clinical predictions using information from genomics datasets as well is not a frequently observed phenomenon in research. Precision…
In this paper, we propose a novel graph neural network-based recommendation model called KGLN, which leverages Knowledge Graph (KG) information to enhance the accuracy and effectiveness of personalized recommendations. We first use a…
Combining logic and probability has been a long stand- ing goal of AI research. Markov Logic Networks (MLNs) achieve this by attaching weights to formulas in first-order logic, and can be seen as templates for constructing features for…
Traffic forecasting is a classical task for traffic management and it plays an important role in intelligent transportation systems. However, since traffic data are mostly collected by traffic sensors or probe vehicles, sensor failures and…
Medical data mainly includes various types of biomedical signals and medical images, which can be used by professional doctors to make judgments on patients' health conditions. However, the interpretation of medical data requires a lot of…
The recent development of high-throughput sequencing creates a large collection of multi-omics data, which enables researchers to better investigate cancer molecular profiles and cancer taxonomy based on molecular subtypes. Integrating…
Knowledge graph (KG) based reasoning has been regarded as an effective means for the analysis of semantic networks and is of great usefulness in areas of information retrieval, recommendation, decision-making, and man-machine interaction.…
We introduce neural Markov logic networks (NMLNs), a statistical relational learning system that borrows ideas from Markov logic. Like Markov logic networks (MLNs), NMLNs are an exponential-family model for modelling distributions over…
Brain Functional Networks (BFNs), graph theoretical models of brain activity data, provide a systems perspective of complex functional connectivity within the brain. Neurological disorders are known to have basis in abnormal functional…
Commonsense knowledge-graphs (CKGs) are important resources towards building machines that can 'reason' on text or environmental inputs and make inferences beyond perception. While current CKGs encode world knowledge for a large number of…
In the field of health-care and bio-medical research, understanding the relationship between the symptoms of diseases is crucial for early diagnosis and determining hidden relationships between diseases. The study aimed to understand the…
The 7-point checklist (7PCL) is a widely used diagnostic tool in dermoscopy for identifying malignant melanoma by assigning point values to seven specific attributes. However, the traditional 7PCL is limited to distinguishing between…
This paper studies semi-supervised object classification in relational data, which is a fundamental problem in relational data modeling. The problem has been extensively studied in the literature of both statistical relational learning…
Objective: We investigate whether deep learning techniques for natural language processing (NLP) can be used efficiently for patient phenotyping. Patient phenotyping is a classification task for determining whether a patient has a medical…
We study the problem of learning the Markov order in categorical sequences that represent paths in a network, i.e. sequences of variable lengths where transitions between states are constrained to a known graph. Such data pose challenges…
Biomedical research has revealed the crucial role of miRNAs in the progression of many diseases, and computational prediction methods are increasingly proposed for assisting biological experiments to verify miRNA-disease associations…
A two-layer neural network model that systematically includes correlations among input variables to arbitrary order and is designed to implement Bayes inference has been adapted to classify breast cancer tumors as malignant or benign,…
This paper introduces new efficient algorithms for two problems: sampling conditional on vertex degrees in unweighted graphs, and sampling conditional on vertex strengths in weighted graphs. The algorithms can sample conditional on the…