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Cohort studies employ pairwise measures of association to quantify dependencies among conditions and exposures. To reliably use these measures to draw conclusions about the underlying association strengths requires that the measures be…

Quantitative Methods · Quantitative Biology 2017-05-30 Venkateshan Kannan , Kristina Alexandersson , Jesper Tegner

The question of whether biological populations survive or are eventually driven to extinction has long been examined using mathematical models. In this work we study population survival or extinction using a stochastic, discrete…

Populations and Evolution · Quantitative Biology 2021-09-15 Yifei Li , Stuart T. Johnston , Pascal R. Buenzli , Peter van Heijster , Matthew J. Simpson

Many complex systems can be represented as networks, and how a network breaks up into subnetworks or communities is of wide interest. However, the development of a method to detect nodes important to communities that is both fast and…

Physics and Society · Physics 2015-05-27 Yang Wang , Zengru Di , Ying Fan

In this paper we deal with pedestrian modeling, aiming at simulating crowd behavior in normal and emergency scenarios, including highly congested mass events. We are specifically concerned with a new agent-based, continuous-in-space,…

Adaptation and Self-Organizing Systems · Physics 2023-11-23 E. Cristiani , M. Menci , A. Malagnino , G. G. Amaro

The population size has far-reaching effects on the fitness of the population, that, in its turn influences the population extinction or persistence. Understanding the density- and age-dependent factors will facilitate more accurate…

Dynamical Systems · Mathematics 2021-02-12 Jonathan Andersson , Vladimir Kozlov , Vladimir G. Tkachev , Sonja Radosavljevic , Uno Wennergren

Models of coordinated behavior of populations living in the same environment are introduced for the cases when they either compete with each other, or they both gain by mutual interactions, or finally when one hunts the other one. The…

Dynamical Systems · Mathematics 2014-03-19 D. Melchionda , E. Pastacaldi , C. Perri , E. Venturino

The rapid advancement of environmental sequencing technologies, such as metagenomics, has significantly enhanced our ability to study microbial communities. The eubiotic composition of these communities is crucial for maintaining ecological…

Disordered Systems and Neural Networks · Physics 2025-08-27 Jacopo Pasqualini , Amos Maritan , Andrea Rinaldo , Sonia Facchin , Edoardo Savarino , Ada Altieri , Samir Suweis

Centrality metrics have become a popular concept in network science and optimization. Over the years, centrality has been used to assign importance and identify influential elements in various settings, including transportation,…

Social and Information Networks · Computer Science 2024-05-07 Mustafa Can Camur , Chrysafis Vogiatzis

Range migrations in response to climate change, invasive species and the emergence of novel ecosystems highlight the importance of temporal turnover in community composition as a fundamental part of global change in the Anthropocene.…

Quantitative Methods · Quantitative Biology 2016-04-25 Hideyasu Shimadzu , Maria Dornelas , Anne E. Magurran

It is of paramount importance to uncover influential nodes to control diffusion phenomena in a network. In recent works, there is a growing trend to investigate the role of the community structure to solve this issue. Up to now, the vast…

Social and Information Networks · Computer Science 2022-02-02 Stephany Rajeh , Marinette Savonnet , Eric Leclercq , Hocine Cherifi

We present a compact matrix formulation of the modularity, a commonly used quality measure for the community division in a network. Using this formulation we calculate the density of modularities, a statistical measure of the probability of…

Statistical Mechanics · Physics 2016-08-16 Erik Holmström , Nicolas Bock , Johan Brännlund

A novel approach rooted on the notion of consensus clustering, a strategy developed for community detection in complex networks, is proposed to cope with the heterogeneity that characterizes connectivity matrices in health and disease. The…

Neurons and Cognition · Quantitative Biology 2017-05-09 Javier Rasero , Mario Pellicoro , Leonardo Angelini , Jesus M. Cortes , Daniele Marinazzo , Sebastiano Stramaglia

We propose a general form of community detecting functions for finding the communities or the optimal partition of a random network, and examine the concentration and stability of the function values using the bounded difference martingale…

Probability · Mathematics 2012-03-28 Weituo Zhang , Chjan C. Lim

We address the question of finding the community structure of a complex network. In an earlier effort [H. Zhou, {\em Phys. Rev. E} (2003)], the concept of network random walking is introduced and a distance measure defined. Here we…

Biological Physics · Physics 2009-11-10 Haijun Zhou

When spreading information over social networks, seeding algorithms selecting users to start the dissemination play a crucial role. The majority of existing seeding algorithms focus solely on maximizing the total number of reached nodes,…

Social and Information Networks · Computer Science 2022-08-29 Maciej Styczen , Bing-Jyue Chen , Ya-Wen Teng , Yvonne-Anne Pignolet , Lydia Chen , De-Nian Yang

Most aspects of our lives are governed by large, highly developed institutions that integrate several governance tasks under one authority structure. But theorists differ as to the mechanisms that drive the development of such concentrated…

Social and Information Networks · Computer Science 2019-09-11 Seth Frey , Robert W Sumner

Measuring the vulnerability of communities in complex network has become an important topic in the research of complex system. Numerous existing vulnerability measures have been proposed to solve such problems, however, most of these…

Social and Information Networks · Computer Science 2019-10-01 Tao Wen , Yong Deng

We use dynamical generating functionals to study the stability and size of communities evolving in Lotka-Volterra systems with random interaction coefficients. The size of the eco-system is not set from the beginning. Instead, we start from…

Populations and Evolution · Quantitative Biology 2018-10-17 Tobias Galla

A general procedure to formulate asexual (unstructured, deterministic) population dynamical models resulting from individual pairwise interactions is proposed. Individuals are characterized by a continuous strategy that represents all their…

Populations and Evolution · Quantitative Biology 2014-11-04 Fabio Dercole

Ecological resilience refers to the ability of a system to retain its state when subject to state variables perturbations or parameter changes. While understanding and quantifying resilience is crucial to anticipate the possible regime…

Dynamical Systems · Mathematics 2019-05-10 Artur César Fassoni , Denis de Carvalho Braga