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BerkeleyGW is a massively parallel computational package for electron excited-state properties that is based on the many-body perturbation theory employing the ab initio GW and GW plus Bethe-Salpeter equation methodology. It can be used in…

The study of twisted two-dimensional (2D) materials, where twisting layers create moir\'e superlattices, has opened new opportunities for investigating topological phases and strongly correlated physics. While systems such as twisted…

Open source bioinformatics tools running under MS Windows are rare to find, and those running under Windows HPC cluster are almost non-existing. This is despite the fact that the Windows is the most popular operating system used among life…

Mathematical Software · Computer Science 2009-05-06 Mohamed Abouelhoda , Hisham Mohamed

We introduce software for reading, writing and processing fluorescence single-molecule and image spectroscopy data and developing analysis pipelines that unifies various spectroscopic analysis tools. Our software can be used for processing…

The exploration of the Berry phase in classical mechanics has opened new frontiers in understanding the dynamics of physical systems, analogous to quantum mechanics. Here, we show controlled accumulation of the Berry phase in a two-level…

Quantum Physics · Physics 2025-04-04 Kazi T. Mahmood , M. Arif Hasan

This paper presents the WiFi-Sensor-for-Robotics (WSR) toolbox, an open source C++ framework. It enables robots in a team to obtain relative bearing to each other, even in non-line-of-sight (NLOS) settings which is a very challenging…

Robotics · Computer Science 2021-11-16 Ninad Jadhav , Weiying Wang , Diana Zhang , Swarun Kumar , Stephanie Gil

ArQTiC is an open-source, full-stack software package built for the simulations of materials on quantum computers. It currently can simulate materials that can be modeled by any Hamiltonian derived from a generic, one-dimensional,…

Quantum Physics · Physics 2021-06-10 Lindsay Bassman , Connor Powers , Wibe A. de Jong

A three-dimensional (3D) nodal-loop semimetal phase is exploited to engineer a number of intriguing phases featuring different peculiar topological surface states. In particular, by introducing various two-dimensional gap terms to a 3D…

Mesoscale and Nanoscale Physics · Physics 2017-12-20 Linhu Li , Han Hoe Yap , Miguel A. N. Araújo , Jiangbin Gong

Ultrafast optical control of the structural and electronic properties of various quantum materials has recently sparked great interest. In particular, photoinduced quantum phase transition between distinct topological phases has been…

Materials Science · Physics 2022-06-07 Niraj Aryal , Xilian Jin , Qiang Li , Mengkun Liu , A. M. Tsvelik , Weiguo Yin

Network analyses, such as of gene co-expression networks, metabolic networks and ecological networks have become a central approach for the systems-level study of biological data. Several software packages exist for generating and analyzing…

Molecular Networks · Quantitative Biology 2021-04-26 Deisy Morselli Gysi , Andre Voigt , Tiago de Miranda Fragoso , Eivind Almaas , Katja Nowick

Van Roosbroeck's equations constitute a versatile tool to determine the dynamics of electrons under time- and space-dependent perturbations. Extensively utilized in ordinary semiconductors, their potential to model devices made from…

Mesoscale and Nanoscale Physics · Physics 2023-08-23 Pierre-Antoine Graham , Simon Bertrand , Michaël Bédard , Robin Durand , Ion Garate

Topological phases have attracted much interest in recent years. While there are a number of three-dimensional materials exhibiting topological properties, there are relatively few two-dimensional examples aside from the well-known quantum…

Strongly Correlated Electrons · Physics 2015-06-22 Xiang Hu , Zhicheng Zhong , Gregory A. Fiete

Estimation of the operational topology of the power grid is necessary for optimal market settlement and reliable dynamic operation of the grid. This paper presents a novel framework for topology estimation for general power grids (loopy or…

Optimization and Control · Mathematics 2017-04-28 Saurav Talukdar , Deepjyoti Deka , Blake Lundstrom , Michael Chertkov , Murti V. Salapaka

In van der Waals heterostructures, electronic bands of two-dimensional (2D) materials, their nontrivial topology, and electron-electron interactions can be dramatically changed by a moire pattern induced by twist angles between different…

Topological materials ranging from topological insulators to semimetals host many novel quantum phenomena including quantum spin Hall effect and topological Fermi arcs. Transitions between these topological phases have attracted much…

Mesoscale and Nanoscale Physics · Physics 2026-04-21 Changcang Qiao , Chen-Chia Hsu , Tao Zhang , Zhiming Sun , Dong Qian , Yang-hao Chan , Peng Chen

Photonic crystals have provided a controllable platform to examine excitingly new topological states in open systems. In this work, we reveal photonic topological corner states in a photonic graphene with mirror-symmetrically patterned gain…

Mesoscale and Nanoscale Physics · Physics 2020-05-20 Ya-Jie Wu , Chao-Chen Liu , Junpeng Hou

Topological quantum materials, including topological insulators and superconductors, Dirac semimetals and Weyl semimetals, have attracted much attention recently for their unique electronic structure, spin texture and physical properties.…

Pulgon-tools is an open-source software package providing building blocks for the analysis and modeling of quasi-one-dimensional (quasi-1D) periodic systems based on line-group theory. While mature libraries exist for space-group detection…

Computational Physics · Physics 2026-03-31 Yu-Jie Cen , Sandro Wieser , Georg K. H. Madsen , Jesús Carrete

The topology of the electronic band structure of solids can be described by its Berry curvature distribution across the Brillouin zone. We theoretically introduce and experimentally demonstrate a general methodology based on the measurement…

Weyl algebra is a simple noncommutative system used in quantum mechanics. Here I introduce the weyl package, written in the R computing language, which furnishes functionality for working with univariate and multivariate Weyl algebras. The…

Symbolic Computation · Computer Science 2022-12-20 Robin K. S. Hankin