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In Bayesian inference, we are usually interested in the numerical approximation of integrals that are posterior expectations or marginal likelihoods (a.k.a., Bayesian evidence). In this paper, we focus on the computation of the posterior…

Computation · Statistics 2025-02-05 F. Llorente , L. Martino , D. Delgado

Model selection is a fundamental part of the applied Bayesian statistical methodology. Metrics such as the Akaike Information Criterion are commonly used in practice to select models but do not incorporate the uncertainty of the models'…

Applications · Statistics 2021-01-11 Iwona Hawryluk , Swapnil Mishra , Seth Flaxman , Samir Bhatt , Thomas A. Mellan

Bayesian model comparison relies upon the model evidence, yet for many models of interest the model evidence is unavailable in closed form and must be approximated. Many of the estimators for evidence that have been proposed in the Monte…

Methodology · Statistics 2014-05-02 Chris J. Oates , Theodore Papamarkou , Mark Girolami

Within path sampling framework, we show that probability distribution divergences, such as the Chernoff information, can be estimated via thermodynamic integration. The Boltzmann-Gibbs distribution pertaining to different Hamiltonians is…

Methodology · Statistics 2013-10-18 Silia Vitoratou , Ioannis Ntzoufras

Bayesian inference with stochastic models is often difficult because their likelihood functions involve high-dimensional integrals. Approximate Bayesian Computation (ABC) avoids evaluating the likelihood function and instead infers model…

We introduce the Binless Multidimensional Thermodynamic Integration (BMTI) method for nonparametric, robust, and data-efficient density estimation. BMTI estimates the logarithm of the density by initially computing log-density differences…

Machine Learning · Statistics 2026-05-18 Matteo Carli , Alex Rodriguez , Alessandro Laio , Aldo Glielmo

Bayesian statistical inference has become increasingly important for the analysis of observations from the Advanced LIGO and Advanced Virgo gravitational-wave detectors. To this end, iterative simulation techniques, in particular nested…

Data Analysis, Statistics and Probability · Physics 2019-04-25 Patricio Maturana Russel , Renate Meyer , John Veitch , Nelson Christensen

Using normalizing flows and reweighting, Boltzmann Generators enable equilibrium sampling from a Boltzmann distribution, defined by an energy function and thermodynamic state. In this work, we introduce Thermodynamic Interpolation (TI),…

Chemical Physics · Physics 2024-11-18 Selma Moqvist , Weilong Chen , Mathias Schreiner , Feliks Nüske , Simon Olsson

The issue of discrete probability estimation for samples of small size is addressed in this study. The maximum likelihood method often suffers over-fitting when insufficient data is available. Although the Bayesian approach can avoid…

Machine Learning · Computer Science 2012-12-13 Takashi Isozaki

A fully Bayesian treatment of complicated predictive models (such as deep neural networks) would enable rigorous uncertainty quantification and the automation of higher-level tasks including model selection. However, the intractability of…

We introduce a new approach to reconstruction of the thermodynamic functions and phase boundaries in two-parametric statistical mechanics systems. Our method is based on expressing the Fisher metric in terms of the posterior distributions…

Statistical Mechanics · Physics 2022-06-28 Alexander Lobashev , Mikhail V. Tamm

The Gibbs-Boltzmann distribution offers a physically interpretable way to massively reduce the dimensionality of high dimensional probability distributions where the extensive variables are `features' and the intensive variables are…

Statistical Mechanics · Physics 2020-05-27 Purushottam D. Dixit

Statistical inference can be seen as information processing involving input information and output information that updates belief about some unknown parameters. We consider the Bayesian framework for making inferences about dynamical…

Statistics Theory · Mathematics 2022-01-17 Artur O. Lopes , Silvia R. C. Lopes , Paulo Varandas

Integration over non-negative integrands is a central problem in machine learning (e.g. for model averaging, (hyper-)parameter marginalisation, and computing posterior predictive distributions). Bayesian Quadrature is a probabilistic…

Machine Learning · Statistics 2018-12-05 Ed Wagstaff , Saad Hamid , Michael Osborne

Thermodynamic Integration (TI) is the state-of-the-art computational technique for accurate Gibbs free energy predictions of solids. Conventional TI schemes start from an NVT harmonic reference and require three successive corrections to…

Specialized Monte Carlo methods are nowadays routinely employed, in combination with thermodynamic integration (TI), to locate phase boundaries of classical many-particle systems. This is especially useful for the fluid-solid transition,…

Statistical Mechanics · Physics 2015-09-09 M. C. Abramo , C. Caccamo , D. Costa , P. V. Giaquinta , G. Malescio , G. Munao' , S. Prestipino

The design of informatively rich input signals is essential for accurate system identification, yet classical Fisher-information-based methods are inherently local and often inadequate in the presence of significant model uncertainty and…

Statistics Theory · Mathematics 2025-12-15 Piotr Bania , Anna Wójcik

Parameter estimation and associated uncertainty quantification is an important problem in dynamical systems characterized by ordinary differential equation (ODE) models that are often nonlinear. Typically, such models have analytically…

Computation · Statistics 2024-03-26 Wai Meng Kwok , Sarat Chandra Dass , George Streftaris

In this paper we develop a new general Bayesian methodology that simultaneously estimates parameters of interest and the marginal likelihood of the model. The proposed methodology builds on Simulated Tempering, which is a powerful algorithm…

Computation · Statistics 2019-06-03 Biljana Jonoska Stojkova , David A. Campbell

Tensor decompositions play a crucial role in numerous applications related to multi-way data analysis. By employing a Bayesian framework with sparsity-inducing priors, Bayesian Tensor Ring (BTR) factorization offers probabilistic estimates…

Machine Learning · Computer Science 2024-12-05 Zerui Tao , Toshihisa Tanaka , Qibin Zhao
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