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Non-linear maps can possess various dynamical behaviors varying from stable steady states and cycles to chaotic oscillations. Most models assume that individuals within a given population are identical ignoring the fundamental role of…

Populations and Evolution · Quantitative Biology 2007-05-23 Georgy P. Karev

In this report, we present a formal approach that addresses the problem of emergence of phase transitions in stochastic and attractive nonlinear threshold Boolean automata networks. Nonlinear networks considered are informally defined on…

Discrete Mathematics · Computer Science 2010-11-23 Jacques Demongeot , Sylvain Sené

Many real-world systems can be modeled as interconnected multilayer networks, namely a set of networks interacting with each other. Here we present a perturbative approach to study the properties of a general class of interconnected…

Physics and Society · Physics 2018-07-10 Giacomo Rapisardi , Alex Arenas , Guido Caldarelli , Giulio Cimini

In systems biology, Boolean networks (BNs) aim at modeling the qualitative dynamics of quantitative biological systems. Contrary to their (a)synchronous interpretations, the Most Permissive (MP) interpretation guarantees capturing all the…

Systems and Control · Electrical Eng. & Systems 2022-06-28 Théo Roncalli , Loïc Paulevé

We propose the use of Deterministic Generalized Asynchronous Random Boolean Networks [Gershenson, 2002] as models of contextual deterministic discrete dynamical systems. We show that changes in the context have drastic effects on the global…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 Carlos Gershenson , Jan Broekaert , Diederik Aerts

Boolean networks may be viewed as idealizations of biological genetic networks, where each node is represented by an on-off switch which is a function of the binary output from some other nodes. We evolve connectivity in a single Boolean…

Biological Physics · Physics 2016-09-08 Stefan Bornholdt , Kim Sneppen

We study expanding circle maps interacting in a heterogeneous random network. Heterogeneity means that some nodes in the network are massively connected, while the remaining nodes are only poorly connected. We provide a probabilistic…

Dynamical Systems · Mathematics 2013-08-27 Tiago Pereira , Sebastian van Strien , Jeroen S. W. Lamb

Boolean networks model finite discrete dynamical systems with complex behaviours. The state of each component is determined by a Boolean function of the state of (a subset of) the components of the network. This paper addresses the…

Artificial Intelligence · Computer Science 2020-02-28 Stéphanie Chevalier , Christine Froidevaux , Loïc Paulevé , Andrei Zinovyev

We study the asymptotic dynamical properties of Boolean networks without local negative cycle. While the properties of Boolean networks without local cycle or without local positive cycle are rather well understood, recent literature raises…

Combinatorics · Mathematics 2016-10-18 Paul Ruet

Interaction graphs provide an important qualitative modeling approach for System Biology. This paper presents a novel approach for construction of interaction graph with the help of Boolean function decomposition. Each decomposition part…

Systems and Control · Computer Science 2014-09-26 Jayanta Kumar Das , Ranjeet Kumar Rout , Pabitra Pal Choudhury

Multilayer network is a potent platform which paves a way to study the interactions among entities in various networks with multiple types of relationships. In this study, the dynamics of discrete-time quantum walk on a multilayer network…

Quantum Physics · Physics 2023-10-05 M. N. Jayakody , Priodyuti Pradhan , Dana Ben Porath , E. Cohen

This paper focuses on the convergence of infor- mation in distributed systems of agents communicating over a network. The information on which the convergence is sought is not represented by real numbers, rather by sets of real numbers,…

Robotics · Computer Science 2011-01-13 Adriano Fagiolini , Nevio Dubbini , Antonio Bicchi

A Boolean network is a discrete dynamical system operating on vectors of Boolean variables. The action of a Boolean network can be conveniently expressed as a system of Boolean update functions, computing the new values for each component…

Formal Languages and Automata Theory · Computer Science 2023-03-02 Artiom Alhazov , Vincent Ferrari-Dominguez , Rudolf Freund , Nicolas Glade , Sergiu Ivanov

The deterministic dynamics of randomly connected neural networks are studied, where a state of binary neurons evolves according to a discreet-time synchronous update rule. We give a theoretical support that the overlap of systems' states…

Statistical Mechanics · Physics 2015-03-10 Taro Toyoizumi , Haiping Huang

Boolean networks can be viewed as functions on the set of binary strings of a given length, described via logical rules. They were introduced as dynamic models into biology, in particular as logical models of intracellular regulatory…

Dynamical Systems · Mathematics 2025-04-16 J. García Galofre , M. Pérez Millán , A. Galarza Rial , R. Laubenbacher , A. Dickenstein

The random map model is a deterministic dynamical system in a finite phase space with n points. The map that establishes the dynamics of the system is constructed by randomly choosing, for every point, another one as being its image. We…

Biological Physics · Physics 2009-11-07 David Romero , Federico Zertuche

We present a novel methodology for modeling and forecasting multivariate realized volatilities using customized graph neural networks to incorporate spillover effects across stocks. The proposed model offers the benefits of incorporating…

Statistical Finance · Quantitative Finance 2023-08-04 Chao Zhang , Xingyue Pu , Mihai Cucuringu , Xiaowen Dong

One of the fundamental structural properties of many networks is triangle closure. Whereas the influence of this transitivity on a variety of contagion dynamics has been previously explored, existing models of coevolving or adaptive network…

Adaptation and Self-Organizing Systems · Physics 2017-01-04 Nishant Malik , Feng Shi , Hsuan-Wei Lee , Peter J. Mucha

Boolean networks serve as discrete models of regulation and signaling in biological cells. Identifying the key controllers of such processes is important for understanding the dynamical systems and planning further analysis. Here we…

Molecular Networks · Quantitative Biology 2012-09-14 Fakhteh Ghanbarnejad , Konstantin Klemm

Boolean circuit is a computational graph that consists of the dynamic directed graph structure and static functionality. The commonly used logic optimization and Boolean matching-based transformation can change the behavior of the Boolean…

Machine Learning · Computer Science 2024-11-19 Liwei Ni , Xinquan Li , Biwei Xie , Huawei Li
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