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Molecular graphs generally contain subgraphs (known as groups) that are identifiable and significant in composition, functionality, geometry, etc. Flat latent representations (node embeddings or graph embeddings) fail to represent, and…

Machine Learning · Computer Science 2019-04-05 Daniel T. Chang

Analyzing interconnection structures among underlying entities or objects in a dataset through the use of graph analytics has been shown to provide tremendous value in many application domains. However, graphs are not the primary…

Databases · Computer Science 2017-02-14 Konstantinos Xirogiannopoulos , Amol Deshpande

Kernelization algorithms, usually a preprocessing step before other more traditional algorithms, are very special in the sense that they return (reduced) instances, instead of final results. This characteristic excludes the freedom of…

Data Structures and Algorithms · Computer Science 2010-10-04 Yixin Cao , Jianer Chen

Deep learning models have gained great popularity in statistical modeling because they lead to very competitive regression models, often outperforming classical statistical models such as generalized linear models. The disadvantage of deep…

Machine Learning · Computer Science 2021-07-26 Ronald Richman , Mario V. Wüthrich

In this work, we provide a theoretical understanding of the framelet-based graph neural networks through the perspective of energy gradient flow. By viewing the framelet-based models as discretized gradient flows of some energy, we show it…

Machine Learning · Computer Science 2022-10-11 Andi Han , Dai Shi , Zhiqi Shao , Junbin Gao

Our capacity to learn representations from data is related to our ability to design filters that can leverage their coupling with the underlying domain. Graph filters are one such tool for network data and have been used in a myriad of…

Signal Processing · Electrical Eng. & Systems 2022-03-16 Bishwadeep Das , Elvin Isufi

Deep neural networks are highly effective at a range of computational tasks. However, they tend to be computationally expensive, especially in vision-related problems, and also have large memory requirements. One of the most effective…

Computer Vision and Pattern Recognition · Computer Science 2018-04-10 Ameya Prabhu , Vishal Batchu , Sri Aurobindo Munagala , Rohit Gajawada , Anoop Namboodiri

While neural networks have achieved vastly enhanced performance over traditional iterative methods in many cases, they are generally empirically designed and the underlying structures are difficult to interpret. The algorithm unrolling…

Computer Vision and Pattern Recognition · Computer Science 2019-02-18 Yuelong Li , Mohammad Tofighi , Vishal Monga , Yonina C. Eldar

Graph generation is a critical task in numerous domains, including molecular design and social network analysis, due to its ability to model complex relationships and structured data. While most modern graph generative models utilize…

Machine Learning · Computer Science 2025-06-04 Xiaohui Chen , Yinkai Wang , Jiaxing He , Yuanqi Du , Soha Hassoun , Xiaolin Xu , Li-Ping Liu

Recent advances in network science have resulted in two distinct research directions aimed at augmenting and enhancing representations for complex networks. The first direction, that of high-order modeling, aims to focus on connectivity…

Social and Information Networks · Computer Science 2023-04-03 Andrea Failla , Salvatore Citraro , Giulio Rossetti

In this paper, we develop a new aligned vertex convolutional network model to learn multi-scale local-level vertex features for graph classification. Our idea is to transform the graphs of arbitrary sizes into fixed-sized aligned vertex…

Machine Learning · Computer Science 2019-02-27 Lu Bai , Lixin Cui , Shu Wu , Yuhang Jiao , Edwin R. Hancock

Most complex systems can be captured by graphs or networks. Networks connect nodes (e.g.\ neurons) through edges (synapses), thus summarizing the system's structure. A popular way of interrogating graphs is community detection, which…

Physics and Society · Physics 2024-09-23 Luis F Seoane

Distributed training of GNNs enables learning on massive graphs (e.g., social and e-commerce networks) that exceed the storage and computational capacity of a single machine. To reach performance comparable to centralized training,…

Machine Learning · Computer Science 2023-05-18 Jiong Zhu , Aishwarya Reganti , Edward Huang , Charles Dickens , Nikhil Rao , Karthik Subbian , Danai Koutra

Traditional approaches to neuroevolution often start from scratch. This becomes prohibitively expensive in terms of computational and data requirements when targeting modern, deep neural networks. Using a warm start could be highly…

Neural and Evolutionary Computing · Computer Science 2024-12-23 Arthur Guijt , Dirk Thierens , Tanja Alderliesten , Peter A. N. Bosman

Complex network theory has been used to study complex systems. However, many real-life systems involve multiple kinds of objects . They can't be described by simple graphs. In order to provide complete information of these systems, we…

Physics and Society · Physics 2015-11-10 Jin-Li Guo , Xin-Yun Zhu

Neural networks that compute over graph structures are a natural fit for problems in a variety of domains, including natural language (parse trees) and cheminformatics (molecular graphs). However, since the computation graph has a different…

Neural and Evolutionary Computing · Computer Science 2017-02-23 Moshe Looks , Marcello Herreshoff , DeLesley Hutchins , Peter Norvig

We introduce Automorphism-based graph neural networks (Autobahn), a new family of graph neural networks. In an Autobahn, we decompose the graph into a collection of subgraphs and apply local convolutions that are equivariant to each…

Machine Learning · Computer Science 2022-02-04 Erik Henning Thiede , Wenda Zhou , Risi Kondor

The interconnectedness and interdependence of modern graphs are growing ever more complex, causing enormous resources for processing, storage, communication, and decision-making of these graphs. In this work, we focus on the task graph…

Machine Learning · Computer Science 2023-01-16 Ryan Wickman , Xiaofei Zhang , Weizi Li

Networks are a powerful tool to model complex systems, and the definition of many Graph Neural Networks (GNN), Deep Learning algorithms that can handle networks, has opened a new way to approach many real-world problems that would be hardly…

Machine Learning · Computer Science 2021-09-28 Marco Grassia , Manlio De Domenico , Giuseppe Mangioni

Deep convolutional neural networks (CNNs) achieve remarkable performance on image classification tasks. Recent studies, however, have demonstrated that generalization abilities are more important than the depth of neural networks for…

Computer Vision and Pattern Recognition · Computer Science 2017-10-04 Atsushi Takeda
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