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This paper introduces a novel multimodal and high-resolution human brain cerebellum lobule segmentation method. Unlike current tools that operate at standard resolution ($1 \text{ mm}^{3}$) or using mono-modal data, the proposed method…

Vertebral body compression fractures are early signs of osteoporosis. Though these fractures are visible on Computed Tomography (CT) images, they are frequently missed by radiologists in clinical settings. Prior research on automatic…

Image and Video Processing · Electrical Eng. & Systems 2022-10-04 Alexey Zakharov , Maxim Pisov , Alim Bukharaev , Alexey Petraikin , Sergey Morozov , Victor Gombolevskiy , Mikhail Belyaev

Deep learning has shown great promise in the ability to automatically annotate organs in magnetic resonance imaging (MRI) scans, for example, of the brain. However, despite advancements in the field, the ability to accurately segment…

Image and Video Processing · Electrical Eng. & Systems 2024-03-26 Cosmin Ciausu , Deepa Krishnaswamy , Benjamin Billot , Steve Pieper , Ron Kikinis , Andrey Fedorov

The detection of new multiple sclerosis (MS) lesions is an important marker of the evolution of the disease. The applicability of learning-based methods could automate this task efficiently. However, the lack of annotated longitudinal data…

Image and Video Processing · Electrical Eng. & Systems 2022-06-17 Reda Abdellah Kamraoui , Boris Mansencal , José V Manjon , Pierrick Coupé

Accurately segmenting different organs from medical images is a critical prerequisite for computer-assisted diagnosis and intervention planning. This study proposes a deep learning-based approach for segmenting various organs from CT and…

Accurate localization and segmentation of intervertebral disc (IVD) is crucial for the assessment of spine disease diagnosis. Despite the technological advances in medical imaging, IVD localization and segmentation are still manually…

Computer Vision and Pattern Recognition · Computer Science 2018-11-21 Jose Dolz , Christian Desrosiers , Ismail Ben Ayed

To understand biological intelligence we need to map neuronal networks in vertebrate brains. Mapping mesoscale neural circuitry is done using injections of tracers that label groups of neurons whose axons project to different brain regions.…

Neurons and Cognition · Quantitative Biology 2025-05-13 Samik Banerjee , Caleb Stam , Daniel J. Tward , Steven Savoia , Yusu Wang , Partha P. Mitra

Purpose: To use and test a labelling algorithm that operates on two-dimensional (2D) reformations, rather than three-dimensional (3D) data to locate and identify vertebrae. Methods: We improved the Btrfly Net (described by Sekuboyina et al)…

Computer Vision and Pattern Recognition · Computer Science 2021-03-01 Anjany Sekuboyina , Markus Rempfler , Alexander Valentinitsch , Bjoern H. Menze , Jan S. Kirschke

Image segmentation and classification are the two main fundamental steps in pattern recognition. To perform medical image segmentation or classification with deep learning models, it requires training on large image dataset with annotation.…

Computer Vision and Pattern Recognition · Computer Science 2020-01-17 Anandhanarayanan Kamalakannan , Shiva Shankar Ganesan , Govindaraj Rajamanickam

Vertebral body compression fractures are reliable early signs of osteoporosis. Though these fractures are visible on Computed Tomography (CT) images, they are frequently missed by radiologists in clinical settings. Prior research on…

Image and Video Processing · Electrical Eng. & Systems 2020-07-21 Maxim Pisov , Vladimir Kondratenko , Alexey Zakharov , Alexey Petraikin , Victor Gombolevskiy , Sergey Morozov , Mikhail Belyaev

Precise delineation of multiple organs or abnormal regions in the human body from medical images plays an essential role in computer-aided diagnosis, surgical simulation, image-guided interventions, and especially in radiotherapy treatment…

Image and Video Processing · Electrical Eng. & Systems 2024-11-19 Shiman Li , Haoran Wang , Yucong Meng , Chenxi Zhang , Zhijian Song

Computer-assisted quantitative analysis on Giga-pixel pathology images has provided a new avenue in histology examination. The innovations have been largely focused on cancer pathology (i.e., tumor segmentation and characterization). In…

Image and Video Processing · Electrical Eng. & Systems 2022-03-24 Ruining Deng , Quan Liu , Can Cui , Zuhayr Asad , Haichun Yang , Yuankai Huo

Intervertebral discs (IVDs), as small joints lying between adjacent vertebrae, have played an important role in pressure buffering and tissue protection. The fully-automatic localization and segmentation of IVDs have been discussed in the…

Image and Video Processing · Electrical Eng. & Systems 2020-09-30 Chuanbo Wang , Ye Guo , Wei Chen , Zeyun Yu

Automated segmentation of the vertebral column in Computed Tomography (CT) scans is a prerequisite for pathological assessment and surgical planning. However, state-of-the-art methods, particularly those based on Transformers or large-scale…

Computer Vision and Pattern Recognition · Computer Science 2026-05-21 K S Nithurshen , Saurabh J. Shigwan

Foot ulcer is a common complication of diabetes mellitus and, associated with substantial morbidity and mortality, remains a major risk factor for lower leg amputations. Extracting accurate morphological features from foot wounds is crucial…

Image and Video Processing · Electrical Eng. & Systems 2022-06-20 Amirreza Mahbod , Gerald Schaefer , Rupert Ecker , Isabella Ellinger

This research proposal discusses two challenges in the field of medical image analysis: the multi-parametric investigation on microstructural and macrostructural characteristics of the cervical spinal cord and deep learning-based medical…

Image and Video Processing · Electrical Eng. & Systems 2024-10-01 Maryam Tavakol Elahi

Because of the complicated mechanism of ankle injury, it is very difficult to diagnose ankle fracture in clinic. In order to simplify the process of fracture diagnosis, an automatic diagnosis model of ankle fracture was proposed. Firstly, a…

Image and Video Processing · Electrical Eng. & Systems 2024-04-01 Hongzhi Liu , Guicheng Li , Jiacheng Nie , Hui Tang , Chunfeng Yang , Qianjin Feng , Hailin Xu , Yang Chen

This paper explores the use of a soft ground-truth mask ("soft mask'') to train a Fully Convolutional Neural Network (FCNN) for segmentation of Multiple Sclerosis (MS) lesions. Detection and segmentation of MS lesions is a complex task…

Computer Vision and Pattern Recognition · Computer Science 2019-01-29 Eytan Kats , Jacob Goldberger , Hayit Greenspan

Deep neural networks have demonstrated exceptional efficacy in stroke lesion segmentation. However, the delineation of small lesions, critical for stroke diagnosis, remains a challenge. In this study, we propose two straightforward yet…

Computer Vision and Pattern Recognition · Computer Science 2024-08-07 Liang Shang , Zhengyang Lou , Andrew L. Alexander , Vivek Prabhakaran , William A. Sethares , Veena A. Nair , Nagesh Adluru

Automatic segmentation of lesions in FDG-18 Whole Body (WB) PET/CT scans using deep learning models is instrumental for determining treatment response, optimizing dosimetry, and advancing theranostic applications in oncology. However, the…

Image and Video Processing · Electrical Eng. & Systems 2023-11-06 Gowtham Krishnan Murugesan , Diana McCrumb , Eric Brunner , Jithendra Kumar , Rahul Soni , Vasily Grigorash , Stephen Moore , Jeff Van Oss