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Controlling real-world networked systems, including ecological, biomedical, and engineered networks that exhibit higher-order interactions, remains challenging due to inherent nonlinearities and large system scales. Despite extensive…

Optimization and Control · Mathematics 2026-03-23 Joshua Pickard , Xin Mao , Can Chen

Topological features based on persistent homology capture high-order structural information so as to augment graph neural network methods. However, computing extended persistent homology summaries remains slow for large and dense graphs and…

Machine Learning · Computer Science 2022-11-16 Zuoyu Yan , Tengfei Ma , Liangcai Gao , Zhi Tang , Yusu Wang , Chao Chen

In this paper, we present an on-line fully dynamic algorithm for maintaining strongly connected component of a directed graph in a shared memory architecture. The edges and vertices are added or deleted concurrently by fixed number of…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-04-11 Muktikanta Sa

Directed graphs occur throughout statistical modeling of networks, and exchangeability is a natural assumption when the ordering of vertices does not matter. There is a deep structural theory for exchangeable undirected graphs, which…

Statistics Theory · Mathematics 2016-12-19 Diana Cai , Nathanael Ackerman , Cameron Freer

Depending on the node ordering, an adjacency matrix can highlight distinct characteristics of a graph. Deriving a "proper" node ordering is thus a critical step in visualizing a graph as an adjacency matrix. Users often try multiple matrix…

Human-Computer Interaction · Computer Science 2022-03-09 Oh-Hyun Kwon , Chiun-How Kao , Chun-houh Chen , Kwan-Liu Ma

We study dynamic network formation from a centralized perspective. In each period, the social planner builds a single link to connect previously unlinked pairs. The social planner is forward-looking, with instantaneous utility monotonic in…

Theoretical Economics · Economics 2025-11-26 Yang Sun , Wei Zhao , Junjie Zhou

The aim of this article is to provide space level maps between configuration spaces of graphs that are predicted by algebraic manipulations of cellular chains. More explicitly, we consider edge contraction and half-edge deletion, and…

Algebraic Topology · Mathematics 2022-01-05 Sanjana Agarwal , Maya Banks , Nir Gadish , Dane Miyata

Constructions of directed configuration graphs based on a given bi-degree distribution were introduced in random graph theory some years ago. These constructions lead to graphs where the degrees of two nodes belonging to the same edge are…

Probability · Mathematics 2017-01-13 Philippe Deprez , Mario V. Wüthrich

This chapter discusses the interplay between structure and dynamics in complex networks. Given a particular network with an endowed dynamics, our goal is to find partitions aligned with the dynamical process acting on top of the network. We…

Social and Information Networks · Computer Science 2020-05-08 Michael T. Schaub , Jean-Charles Delvenne , Renaud Lambiotte , Mauricio Barahona

This paper leverages the framework of algorithms-with-predictions to design data structures for two fundamental dynamic graph problems: incremental topological ordering and cycle detection. In these problems, the input is a directed graph…

Data Structures and Algorithms · Computer Science 2024-02-20 Samuel McCauley , Benjamin Moseley , Aidin Niaparast , Shikha Singh

Graphs are a commonly used construct for representing relationships between elements in complex high dimensional datasets. Many real-world phenomenon are dynamic in nature, meaning that any graph used to represent them is inherently…

Social and Information Networks · Computer Science 2018-11-21 Stephen Bonner , John Brennan , Ibad Kureshi , Georgios Theodoropoulos , Andrew Stephen McGough , Boguslaw Obara

Dynamic graphs are rife with higher-order interactions, such as co-authorship relationships and protein-protein interactions in biological networks, that naturally arise between more than two nodes at once. In spite of the ubiquitous…

Machine Learning · Computer Science 2021-02-09 Manohar Kaul , Masaaki Imaizumi

In the field of complex networks and graph theory, new results are typically tested on graphs generated by a variety of algorithms such as the Erd\H{o}s-R\'{e}nyi model or the Barab\'{a}si-Albert model. Unfortunately, most graph generating…

Combinatorics · Mathematics 2018-08-16 Isaac Klickstein , Francesco Sorrentino

A model of a discrete pregeometry on a microscopic scale is introduced. This model is a finite network of finite elementary processes. The mathematical description is a d-graph that is a generalization of a graph. This is the particular…

General Relativity and Quantum Cosmology · Physics 2010-04-29 Alexey L. Krugly

We introduce a novel architecture for graph networks which is equivariant to any transformation in the coordinate embeddings that preserves the distance between neighbouring nodes. In particular, it is equivariant to the Euclidean and…

Machine Learning · Computer Science 2021-07-13 Francesco Farina , Emma Slade

In this work, we present a probabilistic model for directed graphs where nodes have attributes and labels. This model serves as a generative classifier capable of predicting the labels of unseen nodes using either maximum likelihood or…

Machine Learning · Computer Science 2025-01-06 Diego Huerta , Gerardo Arizmendi

We study the problem of generating graphs with prescribed degree sequences for bipartite, directed, and undirected networks. We first propose a sequential method for bipartite graph generation and establish a necessary and sufficient…

Methodology · Statistics 2026-03-13 Tong Sun , Jianshu Hao , Michael C. Fu , Guangxin Jiang

We present novel graph kernels for graphs with node and edge labels that have ordered neighborhoods, i.e. when neighbor nodes follow an order. Graphs with ordered neighborhoods are a natural data representation for evolving graphs where…

Machine Learning · Computer Science 2018-05-30 Moez Draief , Konstantin Kutzkov , Kevin Scaman , Milan Vojnovic

In this paper, we study the construction and transformation of two-dimensional persistent graphs. Persistence is a generalization to directed graphs of the undirected notion of rigidity. In the context of moving autonomous agent formations,…

Multiagent Systems · Computer Science 2007-05-23 Julien M. Hendrickx , Baris Fidan , Changbin Yu , Brian D. O. Anderson , Vincent D. Blondel

We consider the problem of learning a directed graph $G^\star$ from observational data. We assume that the distribution which gives rise to the samples is Markov and faithful to the graph $G^\star$ and that there are no unobserved…

Statistics Theory · Mathematics 2025-02-25 Pardis Semnani , Elina Robeva