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We discuss parallel algorithms to gather topological information about off-process mesh neighbor elements. This information is commonly called the ghost layer, whose creation is a fundamental, necessary task in executing most parallel,…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-11-01 Johannes Holke , David Knapp , Carsten Burstedde

We present a new hybrid paradigm for parallel adaptive mesh refinement (AMR) that combines the scalability and lightweight architecture of tree-based AMR with the computational efficiency of patch-based solvers for hyperbolic conservation…

Mathematical Software · Computer Science 2014-06-06 Carsten Burstedde , Donna Calhoun , Kyle Mandli , Andy R. Terrel

We present the design and implementation details of a geometric multigrid method on adaptively refined meshes for massively parallel computations. The method uses local smoothing on the refined part of the mesh. Partitioning is achieved by…

Numerical Analysis · Computer Science 2021-08-04 Thomas C. Clevenger , Timo Heister , Guido Kanschat , Martin Kronbichler

The forest-of-octrees approach to parallel adaptive mesh refinement and coarsening (AMR) has recently been demonstrated in the context of a number of large-scale PDE-based applications. Although linear octrees, which store only leaf…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-11-05 Tobin Isaac , Carsten Burstedde , Lucas C. Wilcox , Omar Ghattas

We introduce several parallel algorithms operating on a distributed forest of adaptive quadtrees/octrees. They are targeted at large-scale applications relying on data layouts that are more complex than required for standard finite…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-06-20 Carsten Burstedde

In this work, we present an adaptive unfitted finite element scheme that combines the aggregated finite element method with parallel adaptive mesh refinement. We introduce a novel scalable distributed-memory implementation of the resulting…

Numerical Analysis · Mathematics 2021-09-30 Santiago Badia , Alberto F. Martín , Eric Neiva , Francesc Verdugo

We present an easy to use and flexible grid library for developing highly scalable parallel simulations. The distributed cartesian cell-refinable grid (dccrg) supports adaptive mesh refinement and allows an arbitrary C++ class to be used as…

Distributed, Parallel, and Cluster Computing · Computer Science 2013-01-30 I. Honkonen , S. von Alfthan , A. Sandroos , P. Janhunen , M. Palmroth

A numerical approach for solving evolutionary partial differential equations in two and three space dimensions on block-based adaptive grids is presented. The numerical discretization is based on high-order, central finite-differences and…

Computational Physics · Physics 2019-02-04 Mario Sroka , Thomas Engels , Philipp Krah , Sophie Mutzel , Kai Schneider , Julius Reiss

In this work we formally derive and prove the correctness of the algorithms and data structures in a parallel, distributed-memory, generic finite element framework that supports h-adaptivity on computational domains represented as…

Mathematical Software · Computer Science 2021-09-30 Santiago Badia , Alberto F. Martín , Eric Neiva , Francesc Verdugo

We study the problem of dynamically maintaining the connected components of an undirected graph subject to edge insertions and deletions. We give the first parallel algorithm for the problem which is work-efficient, supports batches of…

Data Structures and Algorithms · Computer Science 2024-11-19 Quinten De Man , Laxman Dhulipala , Adam Karczmarz , Jakub Łącki , Julian Shun , Zhongqi Wang

We present an efficient MPI-parallel geometric multigrid library for quadtree (2D) or octree (3D) grids with adaptive refinement. Cartesian 2D/3D and cylindrical 2D geometries are supported, with second-order discretizations for the…

Computational Physics · Physics 2019-08-26 Jannis Teunissen , Rony Keppens

We present the first implementation of the Active Flux method on adaptively refined Cartesian grids. The Active Flux method is a third order accurate finite volume method for hyperbolic conservation laws, which is based on the use of point…

Numerical Analysis · Mathematics 2022-06-08 Donna Calhoun , Erik Chudzik , Christiane Helzel

We introduce an algorithm that performs a one-directional mesh overset of a parallel forest of octrees with another distributed mesh of unrelated partition. The forest mesh consists of several adaptively refined octrees. Individual smooth…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-03-03 Hannes Brandt , Carsten Burstedde

This work introduces a novel, fully robust and highly-scalable, $h$-adaptive aggregated unfitted finite element method for large-scale interface elliptic problems. The new method is based on a recent distributed-memory implementation of the…

Numerical Analysis · Mathematics 2021-04-07 Eric Neiva , Santiago Badia

Standard gradient-based iteration algorithms for optimization, such as gradient descent and its various proximal-based extensions to nonsmooth problems, are known to converge slowly for ill-conditioned problems, sometimes requiring many…

Numerical Analysis · Mathematics 2026-03-24 G. H. M. Araújo , O. A. Krzysik , H. De Sterck

Solving inverse problems and achieving statistical rigour in landscape evolution models requires running many model realizations. Parallel computation is necessary to achieve this in a reasonable time. However, no previous algorithm is…

Computational Engineering, Finance, and Science · Computer Science 2019-01-23 Richard Barnes

Tree kernels are fundamental tools that have been leveraged in many applications, particularly those based on machine learning for Natural Language Processing tasks. In this paper, we devise a parallel implementation of the sequential…

Computation and Language · Computer Science 2023-05-16 Souad Taouti , Hadda Cherroun , Djelloul Ziadi

This work studies one of the parallel decision tree learning algorithms, pdsCART, designed for scalable and efficient data analysis. The method incorporates three core capabilities. First, it supports real-time learning from data streams,…

Artificial Intelligence · Computer Science 2025-05-20 Zeinab Shiralizadeh

We describe a fast, direct solver for elliptic partial differential equations on a two-dimensional hierarchy of adaptively refined, Cartesian meshes. Our solver, inspired by the Hierarchical Poincar\'e-Steklov (HPS) method introduced by…

Numerical Analysis · Mathematics 2024-04-09 Damyn Chipman , Donna Calhoun , Carsten Burstedde

The multi-level hp-refinement scheme is a powerful extension of the finite element method that allows local mesh adaptation without the trouble of constraining hanging nodes. This is achieved through hierarchical high-order overlay meshes,…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-12-05 John N. Jomo , Nils Zander , Mohamed Elhaddad , Ali Özcan , Stefan Kollmannsberger , Ralf-Peter Mundani , Ernst Rank
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