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Spatial transcriptomics (ST) technologies enable gene expression profiling with spatial resolution, offering unprecedented insights into tissue organization and disease heterogeneity. However, current analysis methods often struggle with…

This paper presents new deterministic and distributed low-diameter decomposition algorithms for weighted graphs. In particular, we show that if one can efficiently compute approximate distances in a parallel or a distributed setting, one…

Data Structures and Algorithms · Computer Science 2022-09-07 Václav Rozhoň , Michael Elkin , Christoph Grunau , Bernhard Haeupler

Finding the minimum spanning tree (MST) of a graph is an important task in computer vision, as it enables a sparse and low-cost representation of connectivity among elements (such as superpixels, points, or regions), which is useful for…

We significantly improve known time bounds for solving the minimum cut problem on undirected graphs. We use a ``semi-duality'' between minimum cuts and maximum spanning tree packings combined with our previously developed random sampling…

Data Structures and Algorithms · Computer Science 2007-05-23 David R. Karger

In many models for large-scale computation, decomposition of the problem is key to efficient algorithms. For distance-related graph problems, it is often crucial that such a decomposition results in clusters of small diameter, while the…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-09-20 Ruben Becker , Yuval Emek , Christoph Lenzen

Based on further studying the low-rank subspace clustering (LRSC) and L2-graph subspace clustering algorithms, we propose a F-graph subspace clustering algorithm with a symmetric constraint (FSSC), which constructs a new objective function…

Computer Vision and Pattern Recognition · Computer Science 2019-12-18 Kai Xu , Xiao-Jun Wu , Wen-Bo Hu

Algorithms for dynamically maintaining minimum spanning trees (MSTs) have received much attention in both the parallel and sequential settings. While previous work has given optimal algorithms for dense graphs, all existing parallel…

Data Structures and Algorithms · Computer Science 2020-10-27 Daniel Anderson , Guy E. Blelloch , Kanat Tangwongsan

Graph Neural Networks (GNNs) are widely applied to graph learning problems such as node classification. When scaling up the underlying graphs of GNNs to a larger size, we are forced to either train on the complete graph and keep the full…

Machine Learning · Computer Science 2024-06-25 Mucong Ding , Tahseen Rabbani , Bang An , Evan Z Wang , Furong Huang

The Stochastic Block Model (SBM) is a widely used random graph model for networks with communities. Despite the recent burst of interest in recovering communities in the SBM from statistical and computational points of view, there are still…

Machine Learning · Statistics 2015-12-16 Amin Jalali , Qiyang Han , Ioana Dumitriu , Maryam Fazel

In this paper, we propose a physically inspired graph-theoretical clustering method, which first makes the data points organized into an attractive graph, called In-Tree, via a physically inspired rule, called Nearest Descent (ND). In…

Machine Learning · Computer Science 2018-01-26 Teng Qiu , Kaifu Yang , Chaoyi Li , Yongjie Li

We consider the problem of subspace clustering: given points that lie on or near the union of many low-dimensional linear subspaces, recover the subspaces. To this end, one first identifies sets of points close to the same subspace and uses…

Machine Learning · Statistics 2014-11-03 Dohyung Park , Constantine Caramanis , Sujay Sanghavi

Spectral clustering is a popular and effective algorithm designed to find $k$ clusters in a graph $G$. In the classical spectral clustering algorithm, the vertices of $G$ are embedded into $\mathbb{R}^k$ using $k$ eigenvectors of the graph…

Data Structures and Algorithms · Computer Science 2023-10-18 Peter Macgregor

Cluster analysis plays a crucial role in database mining, and one of the most widely used algorithms in this field is DBSCAN. However, DBSCAN has several limitations, such as difficulty in handling high-dimensional large-scale data,…

Machine Learning · Computer Science 2024-04-30 Weibing Zhao

Finding a suitable data representation for a specific task has been shown to be crucial in many applications. The success of subspace clustering depends on the assumption that the data can be separated into different subspaces. However,…

Computer Vision and Pattern Recognition · Computer Science 2021-06-21 Zhengrui Ma , Zhao Kang , Guangchun Luo , Ling Tian

Clustering is an effective technique in data mining to generate groups that are the matter of interest. Among various clustering approaches, the family of k-means algorithms and min-cut algorithms gain most popularity due to their…

Machine Learning · Computer Science 2014-11-25 Xiaojun Chang , Feiping Nie , Zhigang Ma , Yi Yang

We present a novel model called One Class Minimum Spanning Tree (OCmst) for novelty detection problem that uses a Convolutional Neural Network (CNN) as deep feature extractor and graph-based model based on Minimum Spanning Tree (MST). In a…

Machine Learning · Computer Science 2020-03-31 Riccardo La Grassa , Ignazio Gallo , Nicola Landro

We propose a simple and efficient clustering method for high-dimensional data with a large number of clusters. Our algorithm achieves high-performance by evaluating distances of datapoints with a subset of the cluster centres. Our…

Machine Learning · Computer Science 2022-03-30 Georgios Exarchakis , Omar Oubari , Gregor Lenz

In this thesis, we present fast deterministic algorithm to find small cuts in distributed networks. Finding small min-cuts for a network is essential for ensuring the quality of service and reliability. Throughout this thesis, we use the…

Data Structures and Algorithms · Computer Science 2020-03-03 Mohit Daga

Nested sampling is an efficient algorithm for the calculation of the Bayesian evidence and posterior parameter probability distributions. It is based on the step-by-step exploration of the parameter space by Monte Carlo sampling with a…

Computation · Statistics 2024-01-30 M. Trassinelli , Pierre Ciccodicola

We propose a novel probabilistic dimensionality reduction framework that can naturally integrate the generative model and the locality information of data. Based on this framework, we present a new model, which is able to learn a smooth…

Machine Learning · Statistics 2016-10-18 Li Wang