Related papers: BARCHAN: Blob Alignment for Robust CHromatographic…
Clustering is one of the most widely used procedures in the analysis of microarray data, for example with the goal of discovering cancer subtypes based on observed heterogeneity of genetic marks between different tissues. It is well-known…
Multi-label chest X-ray (CXR) recognition involves simultaneously diagnosing and identifying multiple labels for different pathologies. Since pathological labels have rich information about their relationship to each other, modeling the…
Generalized Polynomial Chaos (gPC) expansions are well established for forward uncertainty propagation in many application areas. Although the associated computational effort may be reduced in comparison to Monte Carlo techniques, for…
Blind gain and phase calibration (BGPC) is a structured bilinear inverse problem, which arises in many applications, including inverse rendering in computational relighting (albedo estimation with unknown lighting), blind phase and gain…
Programmable self-assembly enables the construction of complex molecular, supramolecular, and crystalline architectures from well-designed building blocks. We introduce a hypergraph-based formalism, Blocks & Bonds (B&B), that generalizes…
A fundamental task in human chromosome analysis is chromosome segmentation. Segmentation plays an important role in chromosome karyotyping. The first step in segmentation is to remove intrusive objects such as stain debris and other noises.…
Classification is one of the core problems in Computer-Aided Diagnosis (CAD), targeting for early cancer detection using 3D medical imaging interpretation. High detection sensitivity with desirably low false positive (FP) rate is critical…
In this study, a new alternative model algorithm has been proposed for assembling amorphous structures, unifying the bosonic paradigm applicable at low temperatures with crystalline models relevant at room and higher temperatures. Physical…
In spite of extensive observations and numerous theoretical studies in the past decades several key questions related with Gamma-Ray Bursts (GRB) emission mechanisms are still to be answered. Precise detection of the GRB polarization…
This paper approaches high-rank matrix completion (HRMC) by filling missing entries in a data matrix where columns lie near a union of subspaces, clustering these columns, and identifying the underlying subspaces. Current methods often lack…
Clustering of proteins is of interest in cancer cell biology. This article proposes a hierarchical Bayesian model for protein (variable) clustering hinging on correlation structure. Starting from a multivariate normal likelihood, we enforce…
Pattern matching is a fundamental tool for answering complex graph queries. Unfortunately, existing solutions have limited capabilities: they do not scale to process large graphs and/or support only a restricted set of search templates or…
CXRs are a crucial and extraordinarily common diagnostic tool, leading to heavy research for CAD solutions. However, both high classification accuracy and meaningful model predictions that respect and incorporate clinical taxonomies are…
Medical image synthesis is a challenging task due to the scarcity of paired data. Several methods have applied CycleGAN to leverage unpaired data, but they often generate inaccurate mappings that shift the anatomy. This problem is further…
Accurate characterization of suspicious microcalcifications is critical to determine whether these calcifications are associated with invasive disease. Our overarching objective is to enable the joint characterization of microcalcifications…
This paper describes the application of a real coded genetic algorithm (GA) to align two or more 2-D images by means of image registration. The proposed search strategy is a transformation parameters-based approach involving the affine…
Periodic dynamical systems ubiquitously exist in science and engineering. The harmonic balance (HB) method and its variants have been the most widely-used approaches for such systems, but are either confined to low-order approximations or…
Credit scoring models, which are among the most potent risk management tools that banks and financial institutes rely on, have been a popular subject for research in the past few decades. Accordingly, many approaches have been developed to…
Here are presenting the blank based time-alignment (BBTA) as a strong analytical approach for treatment of non-linear shift in time occurring in HPLC-MS data. Need of such tool in recent large dataset produced by analytical chemistry and…
Understanding protein flexibility and its dynamic interactions with other molecules is essential for studying protein function. Although cryogenic electron microscopy(cryo-EM) provides an opportunity to observe macromolecular dynamics…