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Related papers: Proton Dynamics in Protein Mass Spectrometry

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The paradigm that the primary amino acid sequence prescribes structure and thus function has for a long time been central to the understanding of protein science. Though the theory is supported by the behaviour of most structured proteins,…

Biological Physics · Physics 2022-12-19 Rickie Xian , Sarah Rauscher

Proton transport property is studied by modelling the intermolecular pair correlation functions of the proton ion with the electrode and the electrolyte of a polymer electrolyte fuel cell (PEMFC) by using Materials-Studio and then applying…

Materials Science · Physics 2023-05-05 S. S. Awulachew , K. N. Nigussa

For over 100 years, scientists have investigated the properties of the proton, which is one of the most abundant components of visible matter in the universe. Nevertheless, researchers do not fully understand many details about its internal…

High Energy Physics - Experiment · Physics 2022-02-01 L. Xia , Ch. Rosner , Y. D. Wang , X. R. Zhou , F. E. Maas , R. Baldini Ferroli , H. M. Hu , G. S. Huang

The understanding of dynamics and functioning of biological membranes and in particular of membrane embedded proteins is one of the most fundamental problems and challenges in modern biology and biophysics. In particular the impact of…

Biological Physics · Physics 2009-12-27 Maikel C. Rheinstadter

Electrospray ion-beam deposition (ES-IBD) is a versatile tool to study structure and reactivity of molecules from small metal clusters to large protein assemblies. It brings molecules gently into the gas phase where they can be accurately…

Firehose-like instabilities (FIs) are cited in multiple astrophysical applications. Of particular interest are the kinetic manifestations in weakly-collisional or even collisionless plasmas, where these instabilities are expected to…

Solar and Stellar Astrophysics · Physics 2022-05-25 R. A. López , A. Micera , M. Lazar , S. Poedts , G. Lapenta , A. N. Zhukov , E. Boella , S. M. Shaaban

Aberration-corrected environmental transmission electron microscopy (ETEM) enables atomic-resolution imaging of dynamic catalytic processes. Correlating atomic-scale structural changes with reaction products detected by mass spectrometry…

Protein dynamics has been investigated on a wide range of time scales. Nano- and picosecond dynamics have been assigned to local fluctuations, while slower dynamics have been attributed to larger conformational changes. However, it is…

We have studied the mobility of the folding catalyst, protein disulphide-isomerase (PDI), by molecular dynamics and by a rapid approach based on flexibility. We analysed our simulations using measures of backbone movement, relative…

Excited-state intramolecular proton transfer (ESIPT) is a fundamental photochemical process in which photoexcitation induces proton transfer within a molecule, leading to the formation of a tautomeric excited state. It was observed…

Chemical Physics · Physics 2026-03-03 Alessandro Nicola Nardi , Morgane Vacher

The dynamics of many macromolecular machines is characterized by chemically-mediated structural changes that achieve large scale functional deployment through local rearrangements of constitutive protein sub-units. Motivated by recent high…

Soft Condensed Matter · Physics 2024-07-16 Noah Toyonaga , L Mahadevan

A low-temperature dynamical transition has been reported in several proteins. We provide the first observation of a `protein-like' dynamical transition in nonbiological aqueous environments. To this aim we exploit the popular colloidal…

Despite significant progress in static protein structure collection and prediction, the dynamic behavior of proteins, one of their most vital characteristics, has been largely overlooked in prior research. This oversight can be attributed…

Biomolecules · Quantitative Biology 2024-09-19 Ce Liu , Jun Wang , Zhiqiang Cai , Yingxu Wang , Huizhen Kuang , Kaihui Cheng , Liwei Zhang , Qingkun Su , Yining Tang , Fenglei Cao , Limei Han , Siyu Zhu , Yuan Qi

Electrospun polymer jets are imaged for the first time at an ultra-high rate of 10,000 frames per second, investigating the process dynamics, and the instability propagation velocity and displacement in space. The polymer concentration,…

Laser Ablation Electrospray Ionization is a recent development in mass spectrometry imaging. It has been shown that lipids and small metabolites can be imaged in various samples such as plant material, tissue sections or bacterial colonies…

Biological Physics · Physics 2013-09-05 András Kiss , Donald F. Smith , Brent R. Reschke , Matthew J. Powell , Ron M. A. Heeren

Electrospray ion beam deposition (ESIBD) is the intact, chemically selective deposition of molecular ions on surfaces in vacuum. Here, we present a general method and dedicated instrumentation for ESIBD-based cryoEM sample preparation of…

The efficiency of a proton exchange membrane (PEM) fuel cell depends on the mobility of protons in the PEM, which is determined by the hydration and temperature of the membrane. While optical techniques or neutron or x-ray scattering…

Materials Science · Physics 2023-01-10 Darshan Chalise , Shreyan Majumdar , David G. Cahill

Mapping the conformational dynamics of proteins is crucial for elucidating their functional mechanisms. While Molecular Dynamics (MD) simulation enables detailed time evolution of protein motion, its computational toll hinders its use in…

A high statistics measurement of the pp --> ppeta reaction at an excess energy of Q = 15.5 MeV has been performed at the internal beam facility COSY-11. The stochastically cooled proton beam and the used detection system allowed to…

Protein dynamics underlie many biological functions, yet remain difficult to characterize due to the high computational cost of molecular dynamics simulations and the scarcity of dynamic structural data. This survey reviews recent advances…

Biomolecules · Quantitative Biology 2026-04-29 Haocheng Tang , Liang Shi , Ya-Shi Zhang , Xixian Liu , Jian Tang , Jiarui Lu
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