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We study a new class of polyominoes, called $p$-Fibonacci polyominoes, defined using $p$-Fibonacci words. We enumerate these polyominoes by applying generating functions to capture geometric parameters such as area, semi-perimeter, and the…

Combinatorics · Mathematics 2024-11-28 Juan F. Pulido , José L. Ramírez , Andrés R. Vindas-Meléndez

One approach to estimating a species tree from a collection of gene trees is to first estimate probabilities of clades from the gene trees, and then to construct the species tree from the estimated clade probabilities. While a greedy…

Populations and Evolution · Quantitative Biology 2012-11-14 Elizabeth S. Allman , James H. Degnan , John A. Rhodes

We prove an asymptotic formula for the number of multi-quadratic number fields of bounded discriminant with a power-saving error term. Furthermore, we explicitly calculate the leading coefficient and extend our result to totally real…

Number Theory · Mathematics 2019-02-18 Robin Fritsch

We prove a new formula for the generating function of multitype Cayley trees counted according to their degree distribution. Using this formula we recover and extend several enumerative results about trees. In particular, we extend some…

Combinatorics · Mathematics 2013-04-08 Olivier Bernardi , Alejandro H. Morales

We show that the number of $k$-matching in a given undirected graph $G$ is equal to the number of perfect matching of the corresponding graph $G_k$ on an even number of vertices divided by a suitable factor. If $G$ is bipartite then one can…

Computational Complexity · Computer Science 2016-08-31 Shmuel Friedland , Daniel Levy

While the game chromatic number of a forest is known to be at most 4, no simple criteria are known for determining the game chromatic number of a forest. We first state necessary and sufficient conditions for forests with game chromatic…

Combinatorics · Mathematics 2014-10-21 Charles Dunn , Victor Larsen , Kira Lindke , Troy Retter , Dustin Toci

Exploratory data analysis is crucial for developing and understanding classification models from high-dimensional datasets. We explore the utility of a new unsupervised tree ensemble called uncharted forest for visualizing class…

Machine Learning · Statistics 2018-07-03 Casey Kneale , Steven D. Brown

As a flexible nonparametric learning tool, the random forests algorithm has been widely applied to various real applications with appealing empirical performance, even in the presence of high-dimensional feature space. Unveiling the…

Statistics Theory · Mathematics 2022-09-27 Chien-Ming Chi , Patrick Vossler , Yingying Fan , Jinchi Lv

A random forest is a popular tool for estimating probabilities in machine learning classification tasks. However, the means by which this is accomplished is unprincipled: one simply counts the fraction of trees in a forest that vote for a…

Machine Learning · Statistics 2018-12-17 Matthew A. Olson , Abraham J. Wyner

This paper introduces a novel hypergraph classification algorithm. The use of hypergraphs in this framework has been widely studied. In previous work, hypergraph models are typically constructed using distance or attribute based methods.…

Machine Learning · Computer Science 2024-05-27 Samuel Barton , Adelle Coster , Diane Donovan , James Lefevre

The multispecies coalescent process models the genealogical relationships of genes sampled from several species, enabling useful predictions about phenomena such as the discordance between the gene tree and the species phylogeny due to…

Populations and Evolution · Quantitative Biology 2020-12-11 Jakub Truszkowski , Celine Scornavacca , Fabio Pardi

We prove that a polynomial fraction of the set of $k$-component forests in the $m \times n$ grid graph have equal numbers of vertices in each component, for any constant $k$. This resolves a conjecture of Charikar, Liu, Liu, and Vuong, and…

Discrete Mathematics · Computer Science 2024-01-12 Sarah Cannon , Wesley Pegden , Jamie Tucker-Foltz

Given a set of colored points in the plane, we ask if there exists a crossing-free straight-line drawing of a spanning forest, such that every tree in the forest contains exactly the points of one color class. We show that the problem is…

Computational Geometry · Computer Science 2018-09-11 Philipp Kindermann , Boris Klemz , Ignaz Rutter , Patrick Schnider , André Schulz

Consider the following process on a simple graph without isolated vertices: Order the edges randomly and keep an edge if and only if it contains a vertex which is not contained in some preceding edge. The resulting set of edges forms a…

Combinatorics · Mathematics 2017-09-12 Zhanar Berikkyzy , Steve Butler , Jay Cummings , Kristin Heysse , Paul Horn , Ruth Luo , Brent Moran

Bicubic maps are in bijection with \beta(0,1)-trees. We introduce two new ways of decomposing \beta(0,1)-trees. Using this we define an endofunction on \beta(0,1)-trees, and thus also on bicubic maps. We show that this endofunction is in…

Combinatorics · Mathematics 2013-06-25 Anders Claesson , Sergey Kitaev , Anna de Mier

A polynomial-time exact algorithm for counting the number of directed acyclic graphs in a Markov equivalence class was recently given by Wien\"obst, Bannach, and Li\'skiewicz (AAAI 2021). In this paper, we consider the more general problem…

Data Structures and Algorithms · Computer Science 2023-06-14 Vidya Sagar Sharma

It will be shown that the polynomial time computable numbers form a field, and especially an algebraically closed field.

Computational Complexity · Computer Science 2007-05-23 Tetsushi Matsui

We give the first polynomial-time algorithm for coloring vertices of P_5-free graphs with k colors. This settles an open problem and generalizes several previously known results.

Discrete Mathematics · Computer Science 2007-05-23 Marcin Kaminski , Vadim Lozin

A complex two-parameter model resembling the classical voter model is introduced to describe macroecological properties of tropical tree communities. Monte-Carlo type computer simulations are performed on the model, investigating species…

Populations and Evolution · Quantitative Biology 2020-12-03 Z. Neda , Sz. Horvat , H. M. Tohati , A. Derzsi , A. Balogh

Counting objects in images is a pattern recognition problem that focuses on identifying an element to determine its incidence and is approached in the literature as Visual Object Counting (VOC). In this work, we propose a methodology to…

Computer Vision and Pattern Recognition · Computer Science 2023-09-04 João V. C. Mazzochin , Gustavo Tiecker , Erick O. Rodrigues