Related papers: Counting bi-colored A'Campo forests
We consider the enumeration of plane trees (rooted ordered trees) whose vertices are colored according to a specific coloring rule that prescribes which possible pairs of colors can occur as the colors of a parent vertex and its child. This…
We prove that for any positive integer $k$, the edges of any graph whose fractional arboricity is at most $k + 1/(3k+2)$ can be decomposed into $k$ forests and a matching.
Phylogenetic trees canonically arise as embeddings of phylogenetic networks. We recently showed that the problem of deciding if two phylogenetic networks embed the same sets of phylogenetic trees is computationally hard, \blue{in…
Counting non-isomorphic tree-like multigraphs that include self-loops and multiple edges is an important problem in combinatorial enumeration, with applications in chemical graph theory, polymer science, and network modeling. Traditional…
We consider the problem of devising algorithms to count exactly the number of independent sets of a graph G . We show that there is a polynomial time algorithm for this problem when G is restricted to the class of strongly orderable graphs,…
In this paper we compare and illustrate the algorithmic use of graphs of bounded tree-width and graphs of bounded clique-width. For this purpose we give polynomial time algorithms for computing the four basic graph parameters independence…
Here we present a new fixed parameter tractable algorithm to compute the hybridization number r of two rooted binary phylogenetic trees on taxon set X in time (6r)^r.poly(n), where n=|X|. The novelty of this approach is that it avoids the…
An equitable partition of a graph $G$ is a partition of the vertex-set of $G$ such that the sizes of any two parts differ by at most one. We show that every graph with an acyclic coloring with at most $k$ colors can be equitably partitioned…
Using the theory of combinatorial species, we compute the cycle index for bipartite graphs, which we use to count unlabeled bipartite graphs and bipartite blocks.
We present some exact expressions for the number of paths of a given length in a perfect $m$-ary tree. We first count the paths in perfect rooted $m$-ary trees and then use the results to determine the number of paths in perfect unrooted…
Recently, Ehrenborg and Van Willenburg defined a class of bipartite graphs that correspond naturally to Ferrers diagrams, and proved several results about them. We give bijective proofs for the (already known) expressions for the number of…
We solve a recent question of Caro, Patk\'os and Tuza by determining the exact maximum number of edges in a bipartite connected graph as a function of the longest path it contains as a subgraph and of the number of vertices in each side of…
Galled trees, directed acyclic graphs that model evolutionary histories with isolated hybridization events, have become very popular due to both their biological significance and the existence of polynomial time algorithms for their…
In this paper, we give a constructive proof of the fact that the treewidth of a graph is at most its divisorial gonality. The proof gives a polynomial time algorithm to construct a tree decomposition of width at most $k$, when an effective…
A widely used method for determining the similarity of two labeled trees is to compute a maximum agreement subtree of the two trees. Previous work on this similarity measure is only concerned with the comparison of labeled trees of two…
Graph isomorphism, subgraph isomorphism, and maximum common subgraphs are classical well-investigated objects. Their (parameterized) complexity and efficiently tractable cases have been studied. In the present paper, for a given set of…
Let $R$ and $B$ be two disjoint sets of points in the plane where the points of $R$ are colored red and the points of $B$ are colored blue, and let $n=|R\cup B|$. A bichromatic spanning tree is a spanning tree in the complete bipartite…
Recent work has shown that not only decision trees (DTs) may not be interpretable but also proposed a polynomial-time algorithm for computing one PI-explanation of a DT. This paper shows that for a wide range of classifiers, globally…
An \emph{acyclic coloring} of a graph is a proper vertex coloring such that the union of any two color classes induces a disjoint collection of trees. The more restricted notion of \emph{star coloring} requires that the union of any two…
In weighted trees, all edges are endowed with positive integral weight. We enumerate weighted bicolored plane trees according to their weight and number of edges.