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A model of multicellular systems with several types of cells is developed from the phase field model. The model is presented as a set of partial differential equations of the field variables, each of which expresses the shape of one cell.…

Biological Physics · Physics 2015-05-30 Makiko Nonomura

In a recent work [1] we presented results for the Bose-Fermi-Hubbard model (BFHM) in the limit of ultrafast fermions. The present work gives an overview over the used methods and an deeper insight into the implications arising from the…

Quantum Gases · Physics 2014-08-21 Alexander Mering

Data-driven materials design often encounters challenges where systems require or possess qualitative (categorical) information. Metal-organic frameworks (MOFs) are an example of such material systems. The representation of MOFs through…

Materials Science · Physics 2023-11-16 Yigitcan Comlek , Thang Duc Pham , Randall Snurr , Wei Chen

In this contribution we investigate the application of phase-field fracture models on non-linear multiscale computational homogenization schemes. In particular, we introduce different phase-fields on a two-scale problem and develop a…

Computational Engineering, Finance, and Science · Computer Science 2023-12-21 Felix Schmidt , Stefan Schuß , Christian Hesch

Free energies play a central role in characterising the behaviour of chemical systems and are among the most important quantities that can be calculated by molecular dynamics simulations. Solvation free energies in various organic solvents,…

Chemical Physics · Physics 2026-02-11 J. Harry Moore , Daniel J. Cole , Gabor Csanyi

Membrane phase-separation is a mechanism that biological membranes often use to locally concentrate specific lipid species in order to organize diverse membrane processes. Phase separation has also been explored as a tool for the design of…

Computational Physics · Physics 2020-06-26 Alexander Zhiliakov , Yifei Wang , Annalisa Quaini , Maxim Olshanskii , Sheereen Majd

In this work, we present a framework for the matrix-free solution to a monolithic quasi-static phase-field fracture model with geometric multigrid methods. Using a standard matrix based approach within the Finite Element Method requires…

Numerical Analysis · Mathematics 2020-10-28 Daniel Jodlbauer , Ulrich Langer , Thomas Wick

We introduce a novel scheme for the mechanistic investigation of solid-solid phase transitions, which we dub \textit{metashooting}. Combining transition path sampling molecular dynamics and metadynamics, this scheme allows for both a…

Statistical Mechanics · Physics 2018-04-24 Samuel Alexander Jobbins , Salah Eddine Boulfelfel , Stefano Leoni

We propose a method for efficiently coupling the finite element method with atomistic simulations, while using molecular dynamics or kinetic Monte Carlo techniques. Our method can dynamically build an optimized unstructured mesh that…

Computational Engineering, Finance, and Science · Computer Science 2018-05-23 Mihkel Veske , Andreas Kyritsakis , Kristjan Eimre , Vahur Zadin , Alvo Aabloo , Flyura Djurabekova

We present a model-free data-driven inference method that enables inferences on system outcomes to be derived directly from empirical data without the need for intervening modeling of any type, be it modeling of a material law or modeling…

Functional Analysis · Mathematics 2021-06-08 Sergio Conti , Franca Hoffmann , Michael Ortiz

In traditional phase-field modeling of multiphase materials, a significant challenge arises from the non-local nature of fracture energy regularization, where interfacial toughness is inherently coupled with the properties of the…

Computational Physics · Physics 2026-04-14 Ye-Hang Qin , Ye Feng

Atomically thin 2-dimensional heterostructures are a promising, novel class of materials with groundbreaking properties. The possiblity of choosing the many constituent components and their proportions allows optimizing these materials to…

Mesoscale and Nanoscale Physics · Physics 2019-10-23 Petri Hirvonen , Vili Heinonen , Haikuan Dong , Zheyong Fan , Ken R. Elder , Tapio Ala-Nissila

Energy based models (EBMs) are appealing for their generality and simplicity in data likelihood modeling, but have conventionally been difficult to train due to the unstable and time-consuming implicit MCMC sampling during contrastive…

Machine Learning · Computer Science 2024-07-23 Junn Yong Loo , Michelle Adeline , Arghya Pal , Vishnu Monn Baskaran , Chee-Ming Ting , Raphael C. -W. Phan

The stationary functional of the all-electron density functional plus dynamical mean field theory (DFT+DMFT) formalism to perform free energy calculations and structural relaxations is implemented for the first time. Here, the first order…

Strongly Correlated Electrons · Physics 2015-12-23 Kristjan Haule , Turan Birol

In this paper, we consider the numerical approximation for a diffuse interface model of the two-phase incompressible inductionless magnetohydrodynamics problem. This model consists of Cahn-Hilliard equations, Navier-Stokes equations and…

Numerical Analysis · Mathematics 2022-02-01 Xiaorong Wang , Xiaodi Zhang

We study phase field equations based on the diffuse-interface approximation of general homogeneous free energy densities showing different local minima of possible equilibrium configurations in perforated/porous domains. The study of such…

Chemical Physics · Physics 2013-10-08 Markus Schmuck , Grigorios A. Pavliotis , Serafim Kalliadasis

In this paper, we focus on modeling and simulation of two-phase flow with moving contact lines and variable density. A thermodynamically consistent phase-field model with General Navier Boundary Condition is developed based on the concept…

Numerical Analysis · Mathematics 2020-01-29 Lingyue Shen , Huaxiong Huang , Ping Lin , Zilong Song , Shixin Xu

A general model is formulated for elasto-plastic materials undergoing linear kinematic hardening to describe microstructure evolution associated with phase transformations. Using infinitesimal strain theory, the model is based on…

Computational Engineering, Finance, and Science · Computer Science 2026-02-20 Sarah Dinkelacker-Steinhoff , Klaus Hackl

We introduce a meshfree collocation framework to model the phase change from liquid to vapor at or above the boiling point. While typical vaporization or boiling simulations focus on the vaporization from the bulk of the fluid, here we…

Fluid Dynamics · Physics 2023-03-22 Pratik Suchde , Heinrich Kraus , Benjamin Bock-Marbach , Joerg Kuhnert

A phase-field crystal model based on the density-field approach incorporating high-order interparticle direct correlations is developed to study vapor-liquid-solid coexistence and transitions within a single continuum description.…

Materials Science · Physics 2020-10-21 Zi-Le Wang , Zhirong Liu , Zhi-Feng Huang , Wenhui Duan
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