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Related papers: Evaluation of Trace Alignment Quality and its Appl…

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The existence of trace links between artifacts of the software development life cycle can improve the efficiency of many activities during software development, maintenance and operations. Unfortunately, the creation and maintenance of…

Software Engineering · Computer Science 2023-07-18 Christof Tinnes

Given that AI systems are set to play a pivotal role in future decision-making processes, their trustworthiness and reliability are of critical concern. Due to their scale and complexity, modern AI systems resist direct interpretation, and…

Artificial Intelligence · Computer Science 2025-01-03 Binxia Xu , Antonis Bikakis , Daniel Onah , Andreas Vlachidis , Luke Dickens

This paper describes a new alignment algorithm for sequences that can be used for determination of deletions and substitutions. It provides several solutions out of which the best one can be chosen on the basis of minimization of gaps or…

Information Theory · Computer Science 2012-11-01 Sandeep Hosangadi , Subhash Kak

The design of a system and its implementation are two tasks often carried out by different individuals on a development team, and can occur weeks or months apart. This creates a potential for divergence between real behavior and the…

Software Engineering · Computer Science 2026-05-11 Reid Anderson , Hassan Reza

Constructing valid and informative conformal prediction regions for multi-dimensional outputs remains a fundamental challenge. While conformal prediction provides finite-sample, distribution-free coverage guarantees, its practical…

Machine Learning · Statistics 2026-05-11 Zhenhan Fang , Aixin Tan , Jian Huang

Alignment-based sequence similarity searches, while accurate for some type of sequences, can produce incorrect results when used on more divergent but functionally related sequences that have undergone the sequence rearrangements observed…

Genomics · Quantitative Biology 2015-01-21 Ivan Borozan , Stuart Watt , Vincent Ferretti

With the growing number of devices, sensors and digital systems, data logs may become uncertain due to, e.g., sensor reading inaccuracies or incorrect interpretation of readings by processing programs. At times, such uncertainties can be…

Artificial Intelligence · Computer Science 2023-11-22 Eli Bogdanov , Izack Cohen , Avigdor Gal

We introduce a method called TracIn that computes the influence of a training example on a prediction made by the model. The idea is to trace how the loss on the test point changes during the training process whenever the training example…

Machine Learning · Computer Science 2020-11-17 Garima Pruthi , Frederick Liu , Mukund Sundararajan , Satyen Kale

Processes tend to interact with other processes and operate on various objects of different types. These objects can influence each other creating dependencies between sub-processes. Analyzing the conformance of such complex processes…

Databases · Computer Science 2023-05-10 Lukas Liss , Jan Niklas Adams , Wil M. P. van der Aalst

The business processes of organizations may deviate from normal control flow due to disruptive anomalies, including unknown, skipped, and wrongly-ordered activities. To identify these control-flow anomalies, process mining can check…

Machine Learning · Computer Science 2025-02-17 Francesco Vitale , Marco Pegoraro , Wil M. P. van der Aalst , Nicola Mazzocca

Process discovery algorithms automatically extract process models from event logs, but high variability often results in complex and hard-to-understand models. To mitigate this issue, trace clustering techniques group process executions…

Machine Learning · Computer Science 2025-12-11 Jari Peeperkorn , Johannes De Smedt , Jochen De Weerdt

Process mining sheds new light on the relationship between process models and real-life processes. Process discovery can be used to learn process models from event logs. Conformance checking is concerned with quantifying the quality of a…

Artificial Intelligence · Computer Science 2019-09-06 Anja F. Syring , Niek Tax , Wil M. P. van der Aalst

Many contemporary software products have subsystems for automatic crash reporting. However, it is well-known that the same bug can produce slightly different reports. To manage this problem, reports are usually grouped, often manually by…

Software Engineering · Computer Science 2020-09-29 Roman Vasiliev , Dmitrij Koznov , George Chernishev , Aleksandr Khvorov , Dmitry Luciv , Nikita Povarov

[Context and motivation] Trace matrices are lynch pins for the development of mission- and safety-critical software systems and are useful for all software systems, yet automated methods for recovering trace links are far from perfect. This…

Software Engineering · Computer Science 2018-04-10 Bhushan Chitre , Jane Huffman Hayes , Alexander Dekhtyar

Within bioinformatics, the textual alignment of amino acid sequences has long dominated the determination of similarity between proteins, with all that implies for shared structure, function and evolutionary descent. Despite the relative…

Quantitative Methods · Quantitative Biology 2016-02-10 Amit K Chattopadhyay , Diar Nasiev , Darren R Flower

Existing performance measures rank delineation algorithms inconsistently, which makes it difficult to decide which one is best in any given situation. We show that these inconsistencies stem from design flaws that make the metrics…

Computer Vision and Pattern Recognition · Computer Science 2019-12-02 Leonardo Citraro , Mateusz Koziński , Pascal Fua

In computed tomography (CT), the projection geometry used for data acquisition needs to be known precisely to obtain a clear reconstructed image. Rigid patient motion is a cause for misalignment between measured data and employed geometry.…

Image and Video Processing · Electrical Eng. & Systems 2023-02-14 Mareike Thies , Fabian Wagner , Noah Maul , Laura Pfaff , Linda-Sophie Schneider , Christopher Syben , Andreas Maier

A novel approach for structure alignment is presented, where the key ingredients are: (1) An error function formulation of the problem simultaneously in terms of binary (Potts) assignment variables and real-valued atomic coordinates. (2)…

Biological Physics · Physics 2007-05-23 M. Ohlsson , C. Peterson , M. Ringner , R. Blankenbecler

Adaptive stretching, where the post compression signal is iteratively stretched to maximize the correlation between the pre and post compression rf echo frames, has demonstrated superior performance compared to gradient based methods. At…

Tissues and Organs · Quantitative Biology 2022-10-25 Shaiban Ahmed , Rasheed Abid , S. Kaisar Alam

Process mining allows analysts to exploit logs of historical executions of business processes to extract insights regarding the actual performance of these processes. One of the most widely studied process mining operations is automated…