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We study the problem of constructing phylogenetic trees for a given set of species. The problem is formulated as that of finding a minimum Steiner tree on $n$ points over the Boolean hypercube of dimension $d$. It is known that an optimal…

Data Structures and Algorithms · Computer Science 2012-06-18 Pranjal Awasthi , Avrim Blum , Jamie Morgenstern , Or Sheffet

In this paper, we consider Steiner forest and its generalizations, prize-collecting Steiner forest and k-Steiner forest, when the vertices of the input graph are points in the Euclidean plane and the lengths are Euclidean distances. First,…

Data Structures and Algorithms · Computer Science 2009-12-08 MohammadHossein Bateni , MohammadTaghi Hajiaghayi

We discuss the computational complexity of approximating maximum a posteriori inference in sum-product networks. We first show NP-hardness in trees of height two by a reduction from maximum independent set; this implies non-approximability…

Artificial Intelligence · Computer Science 2017-09-06 Diarmaid Conaty , Denis D. Mauá , Cassio P. de Campos

We revisit the classic Pandora's Box (PB) problem under correlated distributions on the box values. Recent work of arXiv:1911.01632 obtained constant approximate algorithms for a restricted class of policies for the problem that visit boxes…

Data Structures and Algorithms · Computer Science 2023-07-25 Shuchi Chawla , Evangelia Gergatsouli , Jeremy McMahan , Christos Tzamos

Given a connected vertex-weighted graph $G$, the maximum weight internal spanning tree (MaxwIST) problem asks for a spanning tree of $G$ that maximizes the total weight of internal nodes. This problem is NP-hard and APX-hard, with the…

Data Structures and Algorithms · Computer Science 2020-06-24 Ahmad Biniaz

In this paper, we present a simple factor 6 algorithm for approximating the optimal multiplicative distortion of embedding a graph metric into a tree metric (thus improving and simplifying the factor 100 and 27 algorithms of B\v{a}doiu,…

Metric Geometry · Mathematics 2015-03-17 Victor Chepoi , Feodor Dragan , Ilan Newman , Yuri Rabinovich , Yann Vaxes

We consider the problem of constructing optimal decision trees: given a collection of tests which can disambiguate between a set of $m$ possible diseases, each test having a cost, and the a-priori likelihood of the patient having any…

Data Structures and Algorithms · Computer Science 2017-04-24 Anupam Gupta , Viswanath Nagarajan , R. Ravi

The cost-distance Steiner tree problem seeks a Steiner tree that minimizes the total congestion cost plus the weighted sum of source-sink delays. This problem arises as a subroutine in timing-constrained global routing with a linear delay…

Data Structures and Algorithms · Computer Science 2025-03-07 Stephan Held , Edgar Perner

The maximum common subtree isomorphism problem asks for the largest possible isomorphism between subtrees of two given input trees. This problem is a natural restriction of the maximum common subgraph problem, which is ${\sf NP}$-hard in…

Data Structures and Algorithms · Computer Science 2016-08-23 Andre Droschinsky , Nils M. Kriege , Petra Mutzel

We give a polynomial time, $(1+\epsilon)$-approximation algorithm for the traveling repairman problem (TRP) in the Euclidean plane and on weighted trees. This improves on the known quasi-polynomial time approximation schemes for these…

Data Structures and Algorithms · Computer Science 2014-09-22 René Sitters

Constrained forest problems form a class of graph problems where specific connectivity requirements for certain cuts within the graph must be satisfied by selecting the minimum-cost set of edges. The prize-collecting version of these…

Data Structures and Algorithms · Computer Science 2025-04-23 Ali Ahmadi , Iman Gholami , MohammadTaghi Hajiaghayi , Peyman Jabbarzade , Mohammad Mahdavi

We give the first polynomial-time approximation scheme (PTAS) for the Steiner forest problem on planar graphs and, more generally, on graphs of bounded genus. As a first step, we show how to build a Steiner forest spanner for such graphs.…

Data Structures and Algorithms · Computer Science 2009-11-30 MohammadHossein Bateni , MohammadTaghi Hajiaghayi , Dániel Marx

In the Directed Steiner Tree (DST) problem we are given an $n$-vertex directed edge-weighted graph, a root $r$, and a collection of $k$ terminal nodes. Our goal is to find a minimum-cost arborescence that contains a directed path from $r$…

Data Structures and Algorithms · Computer Science 2018-11-08 Fabrizio Grandoni , Bundit Laekhanukit , Shi Li

Assuming the Unique Games Conjecture (UGC), the best approximation ratio that can be obtained in polynomial time for the MAX CUT problem is $\alpha_{\text{CUT}}\simeq 0.87856$, obtained by the celebrated SDP-based approximation algorithm of…

Computational Complexity · Computer Science 2023-04-13 Joshua Brakensiek , Neng Huang , Aaron Potechin , Uri Zwick

Given a graph $G = (V, E)$, we wish to compute a spanning tree whose maximum vertex degree, i.e. tree degree, is as small as possible. Computing the exact optimal solution is known to be NP-hard, since it generalizes the Hamiltonian path…

Data Structures and Algorithms · Computer Science 2020-06-02 Ran Duan , Haoqing He , Tianyi Zhang

We achieve a (randomized) polynomial-time approximation scheme (PTAS) for the Steiner Forest Problem in doubling metrics. Before our work, a PTAS is given only for the Euclidean plane in [FOCS 2008: Borradaile, Klein and Mathieu]. Our PTAS…

Data Structures and Algorithms · Computer Science 2016-08-24 T-H. Hubert Chan , Shuguang Hu , Shaofeng H. -C. Jiang

We present a new approximation algorithm for the treewidth problem which finds an upper bound on the treewidth and constructs a corresponding tree decomposition as well. Our algorithm is a faster variation of Reed's classical algorithm. For…

Data Structures and Algorithms · Computer Science 2022-06-24 Mahdi Belbasi , Martin Fürer

This paper studies a 4-approximation algorithm for k-prize collecting Steiner tree problems. This problem generalizes both k-minimum spanning tree problems and prize collecting Steiner tree problems. Our proposed algorithm employs two…

Computational Complexity · Computer Science 2018-02-20 Yusa Matsuda , Satoshi Takahashi

We give a 2-approximation algorithm for Non-Uniform Sparsest Cut that runs in time $n^{O(k)}$, where $k$ is the treewidth of the graph. This improves on the previous $2^{2^k}$-approximation in time $\poly(n) 2^{O(k)}$ due to Chlamt\'a\v{c}…

Data Structures and Algorithms · Computer Science 2013-05-08 Anupam Gupta , Kunal Talwar , David Witmer

We study the Steiner Tree problem, in which a set of terminal vertices needs to be connected in the cheapest possible way in an edge-weighted graph. This problem has been extensively studied from the viewpoint of approximation and also…

Data Structures and Algorithms · Computer Science 2026-02-19 Pavel Dvořák , Andreas Emil Feldmann , Dušan Knop , Tomáš Masařík , Tomáš Toufar , Pavel Veselý
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