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Related papers: Lubricated Immersed Boundary Method in Two Dimensi…

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We study the dynamics of a model of membrane vesicle transport into dendritic spines, which are bulbous intracellular compartments in neurons driven by molecular motors. We reduce the lubrication model proposed in [Fai et al., Active…

Cell Behavior · Quantitative Biology 2020-11-19 Youngmin Park , Thomas G. Fai

In this paper, a wetting boundary scheme used to describe the interactions among ternary fluids and solid is proposed in the framework of the lattice Boltzmann method. This scheme for three-phase fluids can preserve the reduction…

Computational Physics · Physics 2017-10-27 Hong Liang , Jiangrong Xu , Jiangxing Chen , Zhenhua Chai , Baochang Shi

The present paper is devoted to implementation of the immersed boundary technique into the Fourier pseudo-spectral solution of the vorticity-velocity formulation of the two-dimensional incompressible Navier--Stokes equations. The immersed…

Mathematical Physics · Physics 2011-10-28 Fereidoun Sabetghadam , Mehdi Badri , Shervin Sharafatmandjoor , Hosnieh Kor

We propose a multiscale computational method for thin-layer flows of complex fluids, termed the synchronized molecular dynamics (SMD) method, which directly couples local molecular dynamics (MD) simulations with a macroscopic lubrication…

Fluid Dynamics · Physics 2026-04-28 Shugo Yasuda , Kotaro Oda , Fumito Muragaki , Yuta Taketa , Masashi Iwayama , Tomohide Ina

The aim of this paper is to provide a survey of the state of the art in the finite element approach to the Immersed Boundary Method (FE-IBM) which has been investigated by the authors during the last decade. In a unified setting, we present…

Numerical Analysis · Mathematics 2014-07-22 Daniele Boffi , Lucia Gastaldi

Molecular dynamics (MD) simulations represent a powerful investigation tool in the field of soft matter. By using shear flows, one can probe the bulk rheology of complex fluids, also beyond the linear response regime, in a way that imitates…

Soft Condensed Matter · Physics 2021-09-30 Sebastian Bindgen , Florian Weik , Rudolf Weeber , Erin Koos , Pierre de Buyl

We describe the dynamics of three-dimensional fluid vesicles in steady shear flow in the vicinity of a wall. This is analyzed numerically at low Reynolds numbers using a boundary element method. The area-incompressible vesicle exhibits…

Soft Condensed Matter · Physics 2009-11-07 Sreejith Sukumaran , Udo Seifert

The study of viscous fluid flow coupled with rigid or deformable solids has many applications in biological and engineering problems, e.g., blood cell transport, drug delivery, and particulate flow. We developed a partitioned approach to…

Fluid Dynamics · Physics 2018-05-24 Jifu Tan , Talid Sinno , Scott Diamond

The immersed boundary (IB) method is a general mathematical framework for studying problems involving fluid-structure interactions in which an elastic structure is immersed in a viscous incompressible fluid. In the IB formulation, the fluid…

Numerical Analysis · Mathematics 2020-10-01 Yuanxun Bao , Alexander D. Kaiser , Jason Kaye , Charles S. Peskin

The dip-coating geometry, where a solid plate is withdrawn from or plunged into a liquid pool, offers a prototypical example of wetting flows involving contact-line motion. Such flows are commonly studied using the lubrication approximation…

Soft Condensed Matter · Physics 2024-11-20 Minkush Kansal , Charu Datt , Vincent Bertin , Jacco H. Snoeijer

The properties of constrained fluids have increasingly gained relevance for applications ranging from materials to biology. In this work, we propose a multiscale model using twin neural networks to investigate the properties of a fluid…

Chemical Physics · Physics 2024-08-07 Peiyuan Gao , George Em Karniadakis , Panos Stinis

Flowing blood displays a phenomenon called margination, in which leukocytes and platelets are preferentially found near blood vessel walls, while erythrocytes are depleted from these regions. Here margination is investigated using direct…

Soft Condensed Matter · Physics 2012-09-05 Amit Kumar , Michael D. Graham

The dynamics and rheology of suspensions of fluid vesicles or red blood cells is investigated by a combination of molecular dynamics and mesoscale hydrodynamics simulations in two dimensions. The vesicle suspension is confined between two…

Soft Condensed Matter · Physics 2013-05-03 A. Lamura , G. Gompper

Accurate and efficient simulation of fluid-structure interaction (FSI) problems remains a central challenge in computational physics. High-order discontinuous Galerkin (DG) methods offer low numerical errors and excellent scalability on…

Fluid Dynamics · Physics 2025-12-08 Yingjie Xia , Stefano Colombo , David Huergo , Jiaqing Kou , Yuting Dai , Esteban Ferrer

The conventional no-slip boundary condition leads to a non-integrable stress singularity at a moving contact line. This makes numerical simulations challenging, especially when capillary effects are essential for the dynamics of the flow.…

Fluid Dynamics · Physics 2017-09-18 Hanna Holmgren , Gunilla Kreiss

Hydro-mechanical processes in rough fractures are highly non-linear and govern productivity and associated risks in a wide range of reservoir engineering problems. To enable high-resolution simulations of hydro-mechanical processes in…

We study the immersed boundary problem in 2-D. It models a 1-D elastic closed string immersed and moving in a fluid that fills the entire plane, where the fluid motion is governed by the 2-D incompressible Navier-Stokes equation with a…

Analysis of PDEs · Mathematics 2025-12-17 Jiajun Tong , Dongyi Wei

Boundary integral numerical methods are among the most accurate methods for interfacial Stokes flow, and are widely applied. They have the advantage that only the boundary of the domain must be discretized, which reduces the number of…

Numerical Analysis · Mathematics 2021-05-18 David M. Ambrose , Michael Siegel , Keyang Zhang

We study the dynamics of the interface between two immiscible fluids in contact with a chemically homogeneous moving solid plate. We consider the generic case of two fluids with any viscosity ratio and of a plate moving in either directions…

Fluid Dynamics · Physics 2015-06-15 T. S. Chan , S. Srivastava , A. Marchand , B. Andreotti , L. Biferale , F. Toschi , J. H. Snoeijer

In this paper, we propose an approach for simulating wall-bounded incompressible turbulent flows by integrating the technology of random vortex method with the core principles of large-eddy simulations (LES). In particular, we employ the…

Fluid Dynamics · Physics 2025-11-11 Zihao Guo , Zhongmin Qian