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The description of complex configuration is a difficult issue. We present a powerful technique for cluster identification and characterization. The scheme is designed to treat with and analyze the experimental and/or simulation data from…

Statistical Mechanics · Physics 2013-08-29 Guangcai Zhang , Aiguo Xu , Guo Lu , Zeyao Mo

This paper establishes the consistency of spectral approaches to data clustering. We consider clustering of point clouds obtained as samples of a ground-truth measure. A graph representing the point cloud is obtained by assigning weights to…

Statistics Theory · Mathematics 2015-08-11 Nicolás García Trillos , Dejan Slepčev

The advent of modern technology, permitting the measurement of thousands of characteristics simultaneously, has given rise to floods of data characterized by many large or even huge datasets. This new paradigm presents extraordinary…

Methodology · Statistics 2019-02-14 A. M. Pires , J. A. Branco

While the strength of Topological Data Analysis has been explored in many studies on high dimensional numeric data, it is still a challenging task to apply it to text. As the primary goal in topological data analysis is to define and…

Machine Learning · Computer Science 2020-03-31 Shafie Gholizadeh , Ketki Savle , Armin Seyeditabari , Wlodek Zadrozny

Topological data analysis (TDA) is a branch of computational mathematics, bridging algebraic topology and data science, that provides compact, noise-robust representations of complex structures. Deep neural networks (DNNs) learn millions of…

In this paper, we explore how to use topological tools to compare dimension reduction methods. We first make a brief overview of some of the methods often used dimension reduction such as Isometric Feature Mapping, Laplacian Eigenmaps, Fast…

Geometric Topology · Mathematics 2023-06-06 Eddy Kwessi

Scientific data has been growing in both size and complexity across the modern physical, engineering, life and social sciences. Spatial structure, for example, is a hallmark of many of the most important real-world complex systems, but its…

A datatset $X$ on $R^2$ is a finite topological space. Current research of a dataset focuses on statistical methods and the algebraic topological method \cite{carlsson}. In \cite{hu}, the concept of typed topological space was introduced…

Machine Learning · Computer Science 2025-08-20 Wanjun Hu

Spatial relationships in multi-species data can indicate and affect system outcomes and behaviors, ranging from disease progression in cancer to coral reef resilience in ecology; therefore, quantifying these relationships is an important…

In contrast to the literature where local patterns in 3D point clouds are captured by customized convolutional operators, in this paper we study the problem of how to effectively and efficiently project such point clouds into a 2D image…

Computer Vision and Pattern Recognition · Computer Science 2020-10-09 Yecheng Lyu , Xinming Huang , Ziming Zhang

Topological data analysis is an emerging mathematical concept for characterizing shapes in multi-scale data. In this field, persistence diagrams are widely used as a descriptor of the input data, and can distinguish robust and noisy…

Machine Learning · Statistics 2017-06-13 Genki Kusano , Kenji Fukumizu , Yasuaki Hiraoka

We start with a simple introduction to topological data analysis where the most popular tool is called a persistent diagram. Briefly, a persistent diagram is a multiset of points in the plane describing the persistence of topological…

Statistics Theory · Mathematics 2017-06-28 Christophe Biscio , Jesper Møller

The problem of dimension reduction is of increasing importance in modern data analysis. In this paper, we consider modeling the collection of points in a high dimensional space as a union of low dimensional subspaces. In particular we…

Machine Learning · Statistics 2020-06-12 Weiwei Li , Jan Hannig , Sayan Mukherjee

Through the use of examples, we explain one way in which applied topology has evolved since the birth of persistent homology in the early 2000s. The first applications of topology to data emphasized the global shape of a dataset, such as…

Algebraic Topology · Mathematics 2021-04-23 Henry Adams , Michael Moy

Point cloud is a principal data structure adopted for 3D geometric information encoding. Unlike other conventional visual data, such as images and videos, these irregular points describe the complex shape features of 3D objects, which makes…

Computer Vision and Pattern Recognition · Computer Science 2020-04-21 Chaoyi Zhang , Yang Song , Lina Yao , Weidong Cai

Shape-Text matching is an important task of high-level shape understanding. Current methods mainly represent a 3D shape as multiple 2D rendered views, which obviously can not be understood well due to the structural ambiguity caused by…

Computer Vision and Pattern Recognition · Computer Science 2023-04-04 Chuan Tang , Xi Yang , Bojian Wu , Zhizhong Han , Yi Chang

The predictions of mean-field electrodynamics can now be probed using direct numerical simulations of random flows and magnetic fields. When modelling astrophysical MHD, it is important to verify that such simulations are in agreement with…

Data Analysis, Statistics and Probability · Physics 2018-09-12 Irina Makarenko , Paul Bushby , Andrew Fletcher , Robin Henderson , Nikolay Makarenko , Anvar Shukurov

Node-link diagrams are a popular method for representing graphs that capture relationships between individuals, businesses, proteins, and telecommunication endpoints. However, node-link diagrams may fail to convey insights regarding graph…

Social and Information Networks · Computer Science 2023-09-20 Paul Rosen , Mustafa Hajij , Bei Wang

Topological correctness is critical for segmentation of tubular structures, which pervade in biomedical images. Existing topological segmentation loss functions are primarily based on the persistent homology of the image. They match the…

Computer Vision and Pattern Recognition · Computer Science 2025-10-29 Bo Wen , Haochen Zhang , Dirk-Uwe G. Bartsch , William R. Freeman , Truong Q. Nguyen , Cheolhong An

Graph pattern matching is often defined in terms of subgraph isomorphism, an NP-complete problem. To lower its complexity, various extensions of graph simulation have been considered instead. These extensions allow pattern matching to be…

Databases · Computer Science 2012-01-04 Shuai Ma , Yang Cao , Wenfei Fan , Jinpeng Huai , Tianyu Wo