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Tree structures appear in many fields of the life sciences, including phylogenetics, developmental biology and nucleic acid structures. Trees can be used to represent RNA secondary structures, which directly relate to the function of…

Machine Learning · Computer Science 2026-01-22 Pengyu Liu , Mariel Vázquez , Nataša Jonoska

Pith detection in tree cross-sections is essential for forestry and wood quality analysis but remains a manual, error-prone task. This study evaluates deep learning models -- YOLOv9, U-Net, Swin Transformer, DeepLabV3, and Mask R-CNN -- to…

Computer Vision and Pattern Recognition · Computer Science 2025-12-02 Tzu-I Liao , Mahmoud Fakhry , Jibin Yesudas Varghese

Treemaps have been widely applied to the visualization of hierarchical data. A treemap takes a weighted tree and visualizes its leaves in a nested planar geometric shape, with sub-regions partitioned such that each sub-region has an area…

Graphics · Computer Science 2023-09-01 Mehdi Behroozi , Reyhaneh Mohammadi , Cody Dunne

We propose a novel tree-like curvilinear structure reconstruction algorithm based on supervised learning and graph theory. In this work we analyze image patches to obtain the local major orientations and the rankings that correspond to the…

Computer Vision and Pattern Recognition · Computer Science 2016-12-09 Seong-Gyun Jeong , Yuliya Tarabalka , Nicolas Nisse , Josiane Zerubia

Random Forest (RF) is a powerful ensemble method for classification and regression tasks. It consists of decision trees set. Although, a single tree is well interpretable for human, the ensemble of trees is a black-box model. The popular…

Machine Learning · Computer Science 2014-07-17 Piotr Płoński , Krzysztof Zaremba

There is a prevailing trend to study urban morphology quantitatively thanks to the growing accessibility to various forms of spatial big data, increasing computing power, and use cases benefiting from such information. The methods developed…

Computer Vision and Pattern Recognition · Computer Science 2021-08-24 Wangyang Chen , Abraham Noah Wu , Filip Biljecki

Accurate recognition of food items along with quality assessment is of paramount importance in the agricultural industry. Such automated systems can speed up the wheel of the food processing sector and save tons of manual labor. In this…

Computer Vision and Pattern Recognition · Computer Science 2022-12-27 Md. Samin Morshed , Sabbir Ahmed , Tasnim Ahmed , Muhammad Usama Islam , A. B. M. Ashikur Rahman

We consider the NP-hard Tree Containment problem that has important applications in phylogenetics. The problem asks if a given leaf-labeled network contains a subdivision of a given leaf-labeled tree. We develop a fast algorithm for the…

Computational Complexity · Computer Science 2017-02-22 Mathias Weller

The recognition and classification of the diversity of materials that exist in the environment around us are a key visual competence that computer vision systems focus on in recent years. Understanding the identification of materials in…

Computer Vision and Pattern Recognition · Computer Science 2017-10-20 Anca Sticlaru

We introduce a dynamic multiscale tree (DMT) architecture that learns how to leverage the strengths of different existing classifiers for supervised multi-label image segmentation. Unlike previous works that simply aggregate or cascade…

Computer Vision and Pattern Recognition · Computer Science 2017-09-07 Samya Amiri , Mohamed Ali Mahjoub , Islem Rekik

Wood logs picking is a challenging task to automate. Indeed, logs usually come in cluttered configurations, randomly orientated and overlapping. Recent work on log picking automation usually assume that the logs' pose is known, with little…

Computer Vision and Pattern Recognition · Computer Science 2022-10-20 Jean-Michel Fortin , Olivier Gamache , Vincent Grondin , François Pomerleau , Philippe Giguère

Fine-grained classification models are designed to focus on the relevant details necessary to distinguish highly similar classes, particularly when intra-class variance is high and inter-class variance is low. Most existing models rely on…

Computer Vision and Pattern Recognition · Computer Science 2025-09-26 Riccardo La Grassa , Ignazio Gallo , Nicola Landro

In this work, we present an ensemble of descriptors for the classification of transmission electron microscopy images of viruses. We propose to combine handcrafted and deep learning approaches for virus image classification. The set of…

Computer Vision and Pattern Recognition · Computer Science 2021-12-28 Loris Nanni , Eugenio De Luca , Marco Ludovico Facin , Gianluca Maguolo

Aiming to advance research in the field of interpretability of deep learning models for tree species classification using TLS 3D point clouds we present insights in the classification abilities of YOLOv8 through a new framework which…

Computer Vision and Pattern Recognition · Computer Science 2026-03-12 Adrian Straker , Paul Magdon , Marco Zullich , Maximilian Freudenberg , Christoph Kleinn , Johannes Breidenbach , Stefano Puliti , Nils Noelke

We propose a novel graph-regularized neural network (GRNN) algorithm for tree species classification. The proposed algorithm encompasses superpixel-based segmentation for graph construction, a pixel-wise neural network classifier, and the…

Computer Vision and Pattern Recognition · Computer Science 2023-05-08 Debmita Bandyopadhyay , Subhadip Mukherjee , James Ball , Grégoire Vincent , David A. Coomes , Carola-Bibiane Schönlieb

Identifying species of trees in aerial images is essential for land-use classification, plantation monitoring, and impact assessment of natural disasters. The manual identification of trees in aerial images is tedious, costly, and…

Computer Vision and Pattern Recognition · Computer Science 2020-08-31 Italos Estilon de Souza , Alexandre Xavier Falcão

Objectives. We generate via advanced Deep Learning (DL) techniques artificial leaf images in an automatized way. We aim to dispose of a source of training samples for AI applications for modern crop management. Such applications require…

Computer Vision and Pattern Recognition · Computer Science 2023-01-11 Alessandro Benfenati , Davide Bolzi , Paola Causin , Roberto Oberti

This paper discusses the potential of applying deep learning techniques for plant classification and its usage for citizen science in large-scale biodiversity monitoring. We show that plant classification using near state-of-the-art…

Machine Learning · Computer Science 2017-06-13 Ignacio Heredia

We propose a method for integration of features extracted using deep representations of Convolutional Neural Networks (CNNs) each of which is learned using a different image dataset of objects and materials for material recognition. Given a…

Computer Vision and Pattern Recognition · Computer Science 2016-04-22 Yan Zhang , Mete Ozay , Xing Liu , Takayuki Okatani

Geometric trees are characterized by their tree-structured layout and spatially constrained nodes and edges, which significantly impacts their topological attributes. This inherent hierarchical structure plays a crucial role in domains such…

Machine Learning · Computer Science 2024-08-19 Zheng Zhang , Allen Zhang , Ruth Nelson , Giorgio Ascoli , Liang Zhao
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