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Proteins adopt multiple structural conformations to perform their diverse biological functions, and understanding these conformations is crucial for advancing drug discovery. Traditional physics-based simulation methods often struggle with…

Biomolecules · Quantitative Biology 2025-03-14 Jiarui Lu , Xiaoyin Chen , Stephen Zhewen Lu , Chence Shi , Hongyu Guo , Yoshua Bengio , Jian Tang

Recommender systems are widely used in online services, with embedding-based models being particularly popular due to their expressiveness in representing complex signals. However, these models often function as a black box, making them…

Information Retrieval · Computer Science 2024-06-25 Yuxuan Lei , Jianxun Lian , Jing Yao , Xu Huang , Defu Lian , Xing Xie

With the widespread adoption of vibe coding, understanding the reasoning and robustness of Large Language Models (LLMs) is critical for their reliable use in programming tasks. While recent studies assess LLMs' ability to predict program…

Software Engineering · Computer Science 2026-05-08 Pedro Orvalho , Marta Kwiatkowska

Modeling structure and behavior of software systems plays a crucial role, in various areas of software engineering. As with other software engineering artifacts, software models are subject to evolution. Supporting modelers in evolving…

Software Engineering · Computer Science 2023-12-20 Christof Tinnes , Thomas Fuchß , Uwe Hohenstein , Sven Apel

Linking information across sources is fundamental to a variety of analyses in social science, business, and government. While large language models (LLMs) offer enormous promise for improving record linkage in noisy datasets, in many…

Computation and Language · Computer Science 2024-06-26 Abhishek Arora , Melissa Dell

We consider, as a means of making programming languages more flexible and powerful, a parsing algorithm in which the parser may freely modify the grammar while parsing. We are particularly interested in a modification of the canonical LR(1)…

Programming Languages · Computer Science 2007-05-23 Blake Hegerle

This dissertation presents an evaluation of several language models on software defect datasets. A language Model (LM) "can provide word representation and probability indication of word sequences as the core component of an NLP system."…

Software Engineering · Computer Science 2019-09-24 Kailun Wang

Pre-trained large language models (LLMs) have recently emerged as a breakthrough technology in natural language processing and artificial intelligence, with the ability to handle large-scale datasets and exhibit remarkable performance…

Software Engineering · Computer Science 2024-03-05 Junjie Wang , Yuchao Huang , Chunyang Chen , Zhe Liu , Song Wang , Qing Wang

Language modeling studies the probability distributions over strings of texts. It is one of the most fundamental tasks in natural language processing (NLP). It has been widely used in text generation, speech recognition, machine…

Computation and Language · Computer Science 2024-07-18 Chengwei Wei , Yun-Cheng Wang , Bin Wang , C. -C. Jay Kuo

Large language models (LLMs) offer significant potential to accelerate systematic literature reviews (SLRs), yet current approaches often rely on brittle, manually crafted prompts that compromise reliability and reproducibility. This…

Computation and Language · Computer Science 2025-09-03 Teo Susnjak

Spatial reasoning plays a vital role in both human cognition and machine intelligence, prompting new research into language models' (LMs) capabilities in this regard. However, existing benchmarks reveal shortcomings in evaluating…

Computation and Language · Computer Science 2024-05-27 Fangjun Li , David C. Hogg , Anthony G. Cohn

Understanding how software developers think, make decisions, and behave remains a key challenge in software engineering (SE). Verbalization techniques (methods that capture spoken or written thought processes) offer a lightweight and…

In recent years, unmanned aerial vehicles (UAVs) have become increasingly popular in our daily lives and have attracted significant research interest in software engineering. At the same time, large language models (LLMs) have made notable…

Software Engineering · Computer Science 2025-12-15 Yihua Chen , Xingle Que , Jiashuo Zhang , Jiachi Chen , Ting Cui , Guangshun Li , Ting Chen

Managing models in a consistent manner is an important task in the field of Model-Driven Engineering (MDE). Although restoring and maintaining consistency is desired in general, recent work has pointed out that always strictly enforcing…

Software Engineering · Computer Science 2021-06-03 Nils Weidmann , Suganya Kannan , Anthony Anjorin

Large language models achieve near-ceiling performance on code generation benchmarks, yet most of the programming languages used by popular benchmarks such as SWE-bench and HumanEval (e.g. Python, JavaScript) are squarely in-distribution.…

Artificial Intelligence · Computer Science 2026-05-13 Aman Sharma , Paras Chopra

Despite the recent broad adoption of Large Language Models (LLMs) across various domains, their potential for enriching information systems in extracting and exploring Linked Data (LD) and Resource Description Framework (RDF) triplestores…

Information Retrieval · Computer Science 2024-09-25 Omar Mussa , Omer Rana , Benoît Goossens , Pablo Orozco-Terwengel , Charith Perera

Spoken language recognition (SLR) refers to the automatic process used to determine the language present in a speech sample. SLR is an important task in its own right, for example, as a tool to analyze or categorize large amounts of…

Computation and Language · Computer Science 2022-08-15 Luciana Ferrer , Diego Castan , Mitchell McLaren , Aaron Lawson

Code performance optimization is paramount in real-world software engineering and critical for production-level systems. While Large Language Models (LLMs) have demonstrated impressive capabilities in code generation and bug fixing, their…

Software Engineering · Computer Science 2025-07-17 Xinyi He , Qian Liu , Mingzhe Du , Lin Yan , Zhijie Fan , Yiming Huang , Zejian Yuan , Zejun Ma

Large language models (LLMs) have exhibited remarkable capabilities across diverse open-domain tasks, yet their application in specialized domains such as civil engineering remains largely unexplored. This paper starts bridging this gap by…

Computation and Language · Computer Science 2025-07-08 Jiachen Liu , Ziheng Geng , Ran Cao , Lu Cheng , Paolo Bocchini , Minghui Cheng

Background: Systematic literature reviews (SLRs) have become prevalent in software engineering research. Several researchers may conduct SLRs on similar topics without a prospective register for SLR protocols. However, even ignoring these…

Software Engineering · Computer Science 2026-01-30 Henry Edison , Nauman Ali