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Related papers: Biomedical Data Warehouses

200 papers

Many problems within personalized medicine and digital health rely on the analysis of continuous-time functional biomarkers and other complex data structures emerging from high-resolution patient monitoring. In this context, this work…

Machine Learning · Statistics 2025-01-14 Marcos Matabuena

The idea of Artificial Intelligence (AI) has a long history. It turned out, however, that reaching intelligence at human levels is more complicated than originally anticipated. Currently we are experiencing a renewed interest in AI, fueled…

Computers and Society · Computer Science 2019-06-27 Michael van Hartskamp , Sergio Consoli , Wim Verhaegh , Milan Petković , Anja van de Stolpe

The aim of this article is to present an overview of the major XML warehousing approaches from the literature, as well as the existing approaches for performing OLAP analyses over XML data (which is termed XML-OLAP or XOLAP; Wang et al.,…

Databases · Computer Science 2017-01-31 Hadj Mahboubi , Marouane Hachicha , Jérôme Darmont

This report discusses the issues of data quality in biobanks. It presents the state-of-the-art in data quality: the definition of data quality, the dimensions of data quality, and the quality management system for achieving or describing…

Computers and Society · Computer Science 2018-12-27 Suneth Ranasinghe , Horst Pichler , Johann Eder

Affective computing, which aims to recognize, interpret, and understand human emotions, provides benefits in healthcare, such as improving patient care and enhancing doctor-patient communication. However, there is a noticeable absence of a…

Human-Computer Interaction · Computer Science 2024-02-22 Yuanyuan Liu , Ke Wang , Lin Wei , Jingying Chen , Yibing Zhan , Dapeng Tao , Zhe Chen

This is a thought piece on data-intensive science requirements for databases and science centers. It argues that peta-scale datasets will be housed by science centers that provide substantial storage and processing for scientists who access…

Databases · Computer Science 2007-05-23 Jim Gray , David T. Liu , Maria Nieto-Santisteban , Alexander S. Szalay , David DeWitt , Gerd Heber

Data warehousing and OLAP applications must nowadays handle complex data that are not only numerical or symbolic. The XML language is well-suited to logically and physically represent complex data. However, its usage induces new theoretical…

Increasingly sophisticated experiments, coupled with large-scale computational models, have the potential to systematically test biological hypotheses to drive our understanding of multicellular systems. In this short review, we explore key…

Quantitative Methods · Quantitative Biology 2019-10-28 Paul Macklin

Biocybersecurity is a novel space for the 21st century that meets our innovations in biotechnology and computing head on. Within this space, many considerations are open for and demand consideration as groups endeavor to develop products…

Computers and Society · Computer Science 2020-03-30 Xavier-Lewis Palmer , Lucas Potter , Saltuk Karahan

Modern tools for biological research, especially microscopy, have rapidly advanced in recent years, which has led to the generation of increasingly large amounts of data on a regular basis. The result is that scientists desperately need…

Other Quantitative Biology · Quantitative Biology 2021-08-18 Andrey Andreev , Tom Morrell , Kristin Briney , Sandra Gesing , Uri Manor

Machine learning methods in healthcare have traditionally focused on using data from a single modality, limiting their ability to effectively replicate the clinical practice of integrating multiple sources of information for improved…

Machine Learning · Computer Science 2024-02-13 Felix Krones , Umar Marikkar , Guy Parsons , Adam Szmul , Adam Mahdi

With the rapid development of biomedical software and hardware, a large amount of relational data interlinking genes, proteins, chemical components, drugs, diseases, and symptoms has been collected for modern biomedical research. Many…

Artificial Intelligence · Computer Science 2021-01-21 Yankai Chen , Yaozu Wu , Shicheng Ma , Irwin King

Data commons collate data with cloud computing infrastructure and commonly used software services, tools and applications to create biomedical resources for the large-scale management, analysis, harmonization, and sharing of biomedical…

Genomics · Quantitative Biology 2018-12-27 Robert L. Grossman

With the rapid development of computer software and hardware technologies, more and more healthcare data are becoming readily available from clinical institutions, patients, insurance companies and pharmaceutical industries, among others.…

Machine Learning · Computer Science 2020-08-24 Jie Xu , Benjamin S. Glicksberg , Chang Su , Peter Walker , Jiang Bian , Fei Wang

Managing personal health data is a challenge in today's fragmented and institution-centric healthcare ecosystem. Individuals often lack meaningful control over their medical records, which are scattered across incompatible systems and…

Multimedia · Computer Science 2026-02-24 Sujaya Maiyya , Shantanu Sharma , Avinash Kumar

Modern biological research is increasingly data-intensive, leading to a growing demand for effective training in biological data science. In this article, we provide an overview of key resources and best practices available within the…

Recent advances in deep generative models have greatly expanded the potential to create realistic synthetic health datasets. These synthetic datasets aim to preserve the characteristics, patterns, and overall scientific conclusions derived…

Machine Learning · Computer Science 2024-07-04 Jennifer A Bartell , Sander Boisen Valentin , Anders Krogh , Henning Langberg , Martin Bøgsted

The past decade has seen an explosion in the amount of digital information stored in electronic health records (EHR). While primarily designed for archiving patient clinical information and administrative healthcare tasks, many researchers…

Machine Learning · Computer Science 2018-02-27 Benjamin Shickel , Patrick Tighe , Azra Bihorac , Parisa Rashidi

Multimodal data modeling has emerged as a powerful approach in clinical research, enabling the integration of diverse data types such as imaging, genomics, wearable sensors, and electronic health records. Despite its potential to improve…

Brain Imaging Data Structure (BIDS) allows the user to organise brain imaging data into a clear and easy standard directory structure. BIDS is widely supported by the scientific community and is considered a powerful standard for…