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In medical image analysis, feature engineering plays an important role in the design and performance of machine learning models. Persistent homology (PH), from the field of topological data analysis (TDA), demonstrates robustness and…
We present a topology-informed approach for classifying particle jets using persistent homology, a framework that captures the structural properties of point clouds. Particle jets produced in proton-proton collisions consist of cascades of…
We introduce a linear dimensionality reduction technique preserving topological features via persistent homology. The method is designed to find linear projection $L$ which preserves the persistent diagram of a point cloud $\mathbb{X}$ via…
Persistent homology (PH) is a recently developed theory in the field of algebraic topology to study shapes of datasets. It is an effective data analysis tool that is robust to noise and has been widely applied. We demonstrate a general…
Persistent homology is a popular and useful tool for analysing finite metric spaces, revealing features that can be used to distinguish sets of unlabeled points and as input into machine learning pipelines. The famous stability theorem of…
Topologically ordered phases of matter display a number of unique characteristics, including ground states that can be interpreted as patterns of closed strings. In this paper, we consider the problem of detecting and distinguishing closed…
A crucial step in the analysis of persistent homology is the transformation of data into an appropriate topological object (in our case, a simplicial complex). Modern packages for persistent homology often construct Vietoris--Rips or other…
In this paper we continue investigating connections between Floer theory and dynamics of Hamiltonian systems, focusing on the barcode entropy of Reeb flows. Barcode entropy is the exponential growth rate of the number of not-too-short bars…
Persistent homology is a tool from Topological Data Analysis (TDA) used to summarize the topology underlying data. It can be conveniently represented through persistence diagrams. Observing a noisy signal, common strategies to infer its…
We introduce persistence matching diagrams induced by set mappings of metric spaces, based on 0-persistent homology of Vietoris-Rips filtrations. Also, we present a geometric definition of the persistence matching diagram that is more…
We introduce a new feature map for barcodes that arise in persistent homology computation. The main idea is to first realize each barcode as a path in a convenient vector space, and to then compute its path signature which takes values in…
The persistence diagram is a central object in the study of persistent homology and has also been investigated in the context of random topology. The more recent notion of the verbose diagram (a.k.a. verbose barcode) is a refinement of the…
Persistent homology is a powerful mathematical tool that summarizes useful information about the shape of data allowing one to detect persistent topological features while one adjusts the resolution. However, the computation of such…
The objective of this paper is to examine the asymptotic behavior of persistence diagrams associated with \v{C}ech filtration. A persistence diagram is a graphical descriptor of a topological and algebraic structure of geometric objects. We…
Graph-based representations of point-cloud data are widely used in data science and machine learning, including epsilon-graphs that contain edges between pairs of data points that are nearer than epsilon and kNN-graphs that connect each…
Persistent homology has emerged as a novel tool for data analysis in the past two decades. However, there are still very few shapes or even manifolds whose persistent homology barcodes (say of the Vietoris-Rips complex) are fully known.…
Persistent homology is a popular and powerful tool for capturing topological features of data. Advances in algorithms for computing persistent homology have reduced the computation time drastically -- as long as the algorithm does not…
Classification in the sense of similarity is an important issue. In this paper, we study similarity classification in Topological Data Analysis. We define a pseudometric $d_{S}^{(p)}$ to measure the distance between barcodes generated by…
Persistent homology is a powerful tool for characterizing the topology of a data set at various geometric scales. When applied to the description of molecular structures, persistent homology can capture the multiscale geometric features and…
In this paper we consider measures of similarity between two sets of strings built up using the Hamming distance and tools of persistence homology as a basis. First we describe the construction of the \v Cech filtration adjoined to the set…