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Related papers: Contact Mechanics of a Small Icosahedral Virus

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In this paper we present a discrete model governing the deformation of a convex regular polygon subjected not to cross a given flat rigid surface, on which it initially lies in correspondence of one point only. First, we set up the model in…

Analysis of PDEs · Mathematics 2022-05-10 Paolo Piersanti , Kristen White , Bogdan Dragnea , Roger Temam

The friction and adhesion between elastic bodies are strongly influenced by the roughness of the surfaces in contact. Here we develop a multiscale molecular dynamics approach to contact mechanics, which can be used also when the surfaces…

Soft Condensed Matter · Physics 2007-05-23 C. Yang , U. Tartaglino , B. N. J. Persson

Using molecular dynamics (MD) we study the dependency of the contact mechanics on the sliding speed when an elastically soft slab (block) is sliding on a rigid substrate with a ${\rm sin} (q_0 x)$ surface height profile. The atoms on the…

Soft Condensed Matter · Physics 2020-08-26 J. Wang , A. Tiwari , I. Sivebaek , B. N. J. Persson

Engineering wear models are generally empirical and lack connections to the physical processes of debris generation at the nanoscale to microscale. Here, we thus analyze wear particle formation for sliding interfaces in dry contact with…

Materials Science · Physics 2019-05-15 Tobias Brink , Jean-François Molinari

The surface tension of compliant materials such as gels provides resistance to deformation in addition to and sometimes surpassing that due to elasticity. This article studies how surface tension changes the contact mechanics of a small…

Soft Condensed Matter · Physics 2015-02-19 Chung-Yuen Hui , Tianshu Liu , Thomas Salez , Elie Raphael , Anand Jagota

We simulate the assembly dynamics of icosahedral capsids from subunits that interconvert between different conformations (or quasi-equivalent states). The simulations identify mechanisms by which subunits form empty capsids with only one…

Biomolecules · Quantitative Biology 2009-09-29 Oren M. Elrad , Michael F. Hagan

We present a molecular dynamics study of the contact between a rigid solid with a randomly rough surface and an elastic block with a flat surface. The numerical calculations mainly focus on the contact area and the interfacial separation…

Soft Condensed Matter · Physics 2008-05-08 C. Yang , B. N. J. Persson

A self-consistent model is developed to investigate attachment / detachment kinetics of two soft, deformable microspheres with irregular surface and coated with flexible binding ligands. The model highlights how the microscale binding…

Cell Behavior · Quantitative Biology 2015-10-13 Sarthok Sircar , Andrei Kotousov , Giang Nguyen , Anthony J. Roberts

We report a molecular dynamics study of the contact between a rigid solid with a randomly rough surface and an elastic block with a flat surface. We study the contact area and the interfacial separation from small contact (low load) to full…

Soft Condensed Matter · Physics 2011-11-10 C. Yang , B. N. J. Persson

Contacts between particles in dense, sheared suspensions are believed to underpin much of their rheology. Roughness and adhesion are known to constrain the relative motion of particles, and thus globally affect the shear response, but an…

We study the adhesive contact between elastic solids with randomly rough, self affine fractal surfaces. We present molecular dynamics (MD) simulation results for the interfacial stress distribution and the wall-wall separation. We compare…

Soft Condensed Matter · Physics 2009-11-13 C. Yang , B. N. J. Persson , J. Israelachvili , K. Rosenberg

This paper is devoted to studies of the mechanical deformation of the S. aureus cell wall. The bacterium is modelled as a thin elastic membrane containing cytoplasm, which is treated as an incompressible fluid. Deformation occurs via Van…

Biological Physics · Physics 2026-04-17 Taras Vasyliev , Saulius Juodkazis , Valeri Lozovski

Viruses are known to tolerate wide ranges of pH and salt conditions and to withstand internal pressures as high as 100 atmospheres. In this paper we investigate the mechanical properties of viral capsids, calling explicit attention to the…

Soft Condensed Matter · Physics 2009-11-11 Roya Zandi , David Reguera

Friction in static and sliding contact of rough surfaces is important in numerous physical phenomena. We seek to understand macroscopically observed static and sliding contact behavior as the collective response of a large number of…

Soft Condensed Matter · Physics 2018-11-12 Srivatsan Hulikal , Nadia Lapusta , Kaushik Bhattacharya

Using molecular dynamics (MD) we study the dependency of the contact mechanics on the sliding speed when an elastic block (cylinder) with a ${\rm cos} (q_0 x)$ surface height profile is sliding in adhesive contact on a rigid flat…

Soft Condensed Matter · Physics 2020-10-21 J. Wang , A. Tiwari , I. M. Sivebaek , B. N. J. Persson

Lubrication forces depend to a high degree on elasticity, texture, charge, chemistry, and temperature of the interacting surfaces. Therefore, by appropriately designing surface properties, we may tailor lubrication forces to reduce…

Soft Condensed Matter · Physics 2020-08-19 Aidan Rinehart , Uǧis L{ā}cis , Thomas Salez , Shervin Bagheri

We study the fluid-mediated approach of a deformable axisymmetric object towards a rigid substrate, focusing on how its shape influences contact formation. For low approach velocities and large Stokes numbers, we show that sharper profiles…

Soft Condensed Matter · Physics 2025-10-21 Joaquin Garcia-Suarez

Single-stranded RNA viruses co-assemble their capsid with the genome and variations in capsid structures can have significant functional relevance. In particular, viruses need to respond to a dehydrating environment to prevent genomic…

This study systematically investigates the dynamics of the bacterial transition from free-swimming to surface adhesion, a process characterized by both height $h$ and inclination angle $\Psi$. The surface entrapment process is divided into…

Soft Condensed Matter · Physics 2025-06-25 Baopi Liu , Bowen Jin , Ning An

Atomistic simulations are used to test the equations of continuum contact mechanics in nanometer scale contacts. Nominally spherical tips, made by bending crystals or cutting crystalline or amorphous solids, are pressed into a flat, elastic…

Materials Science · Physics 2009-11-11 Binquan Luan , Mark O. Robbins
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