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We present the first sub-quadratic time algorithm that with high probability correctly reconstructs phylogenetic trees for short sequences generated by a Markov model of evolution. Due to rapid expansion in sequence databases, such very…

Populations and Evolution · Quantitative Biology 2012-06-01 Daniel G. Brown , Jakub Truszkowski

Two classes of turbo codes over high-order finite fields are introduced. The codes are derived from a particular protograph sub-ensemble of the (dv=2,dc=3) low-density parity-check code ensemble. A first construction is derived as a…

Information Theory · Computer Science 2016-11-17 Gianluigi Liva , Enrico Paolini , Sandro Scalise , Marco Chiani

It is generally unclear whether smaller codes can be "concatenated" to systematically create quantum LDPC codes or their sparse subsystem code cousins where the degree of the Tanner graph remains bounded while increasing the code distance.…

Quantum Physics · Physics 2025-07-21 ChunJun Cao , Brad Lackey

Regenerating codes are a class of distributed storage codes that optimally trade the bandwidth needed for repair of a failed node with the amount of data stored per node of the network. Minimum Storage Regenerating (MSR) codes minimize…

Information Theory · Computer Science 2011-07-27 K. V. Rashmi , Nihar B. Shah , P. Vijay Kumar

In this paper we propose a new construction method for rate-1 Fast-Group-Decodable (FGD) Space-Time-Block Codes (STBC)s for 2^a transmit antennas. We focus on the case of a=2 and we show that the new FGD rate-1 code has the lowest…

Information Theory · Computer Science 2016-11-17 Amr Ismail , Jocelyn Fiorina , Hikmet Sari

We give new constructions of two classes of algebraic code families which are efficiently list decodable with small output list size from a fraction $1-R-\epsilon$ of adversarial errors where $R$ is the rate of the code, for any desired…

Computational Complexity · Computer Science 2020-11-17 Venkatesan Guruswami , Chaoping Xing

Regenerating codes provide an efficient way to recover data at failed nodes in distributed storage systems. It has been shown that regenerating codes can be designed to minimize the per-node storage (called MSR) or minimize the…

Information Theory · Computer Science 2014-06-26 Yunghsiang Han , Hung-Ta Pai , Rong Zheng , Pramod K. Varshney

We consider the rack-aware storage system where \(n\) nodes are organized in \(\bar{n}\) racks each containing \(u\) nodes, and any \(k\) nodes can retrieve the stored file. Moreover, any single node erasure can be recovered by downloading…

Information Theory · Computer Science 2021-01-22 Zhifang Zhang , Liyang Zhou

In renormalization group (RG) flow, the low energy states form a code subspace that is approximately protected against the local short-distance errors. We motivate this connection with an example of spin-blocking RG in classical spin…

High Energy Physics - Theory · Physics 2022-11-16 Keiichiro Furuya , Nima Lashkari , Mudassir Moosa

An $(n,r,h,a,q)$-Local Reconstruction Code (LRC) is a linear code over $\mathbb{F}_q$ of length $n$, whose codeword symbols are partitioned into $n/r$ local groups each of size $r$. Each local group satisfies `$a$' local parity checks to…

Information Theory · Computer Science 2022-05-20 Sivakanth Gopi , Venkatesan Guruswami

In the literature, all the known high-rate MDS codes with the optimal repair bandwidth possess a significantly large sub-packetization level, which may prevent the codes to be implemented in practical systems. To build MDS codes with small…

Information Theory · Computer Science 2020-11-24 Jie Li , Yi Liu , Xiaohu Tang

An $(r,M,2\delta;k)_q$ constant--dimension subspace code, $\delta >1$, is a collection $\cal C$ of $(k-1)$--dimensional projective subspaces of ${\rm PG(r-1,q)}$ such that every $(k-\delta)$--dimensional projective subspace of ${\rm…

Combinatorics · Mathematics 2014-11-14 Antonio Cossidente , Francesco Pavese

Non-uniform message quantization techniques such as reconstruction-computation-quantization (RCQ) improve error-correction performance and decrease hardware complexity of low-density parity-check (LDPC) decoders that use a flooding…

Signal Processing · Electrical Eng. & Systems 2021-04-20 Caleb Terrill , Linfang Wang , Sean Chen , Chester Hulse , Calvin Kuo , Richard Wesel , Dariush Divsalar

We consider the setting of data storage across n nodes in a distributed manner. A data collector (DC) should be able to reconstruct the entire data by connecting to any k out of the n nodes and downloading all the data stored in them. When…

Information Theory · Computer Science 2009-09-05 Nihar B. Shah , K. V. Rashmi , P. Vijay Kumar , Kannan Ramchandran

Quantum computing (QC) promises significant advantages on certain hard computational tasks over classical computers. However, current quantum hardware, also known as noisy intermediate-scale quantum computers (NISQ), are still unable to…

Quantum Physics · Physics 2022-12-23 Elisha Siddiqui Matekole , Esther Ye , Ramya Iyer , Samuel Yen-Chi Chen

Reconciliation is an important step to correct errors in Quantum Key Distribution (QKD). In QKD, after comparing basis, two legitimate parties possess two correlative keys which have some differences and they could obtain identical keys…

Quantum Physics · Physics 2013-05-28 Zhengchao Wei , Zhi Ma

Fractional repetition (FR) codes are a class of regenerating codes for distributed storage systems with an exact (table-based) repair process that is also uncoded, i.e., upon failure, a node is regenerated by simply downloading packets from…

Information Theory · Computer Science 2016-02-09 Oktay Olmez , Aditya Ramamoorthy

Quantization has been an effective technology in ANN (approximate nearest neighbour) search due to its high accuracy and fast search speed. To meet the requirement of different applications, there is always a trade-off between retrieval…

Computer Vision and Pattern Recognition · Computer Science 2020-12-08 Jingkuan Song , Xiaosu Zhu , Lianli Gao , Xin-Shun Xu , Wu Liu , Heng Tao Shen

The Residual Quantization (RQ) framework is revisited where the quantization distortion is being successively reduced in multi-layers. Inspired by the reverse-water-filling paradigm in rate-distortion theory, an efficient regularization on…

Machine Learning · Computer Science 2017-05-02 Sohrab Ferdowsi , Slava Voloshynovskiy , Dimche Kostadinov

This paper propose a decoder architecture for low-density parity-check convolutional code (LDPCCC). Specifically, the LDPCCC is derived from a quasi-cyclic (QC) LDPC block code. By making use of the quasi-cyclic structure, the proposed…

Information Theory · Computer Science 2016-11-17 Chiu-Wing Sham , Xu Chen , Francis C. M. Lau , Yue Zhao , Wai M. Tam