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Cells of the human body have nearly identical genome but exhibit very different phenotypes that allow them to carry out specific functions and react to changes in their surrounding environment. This division of labour is achieved by…

Cell Behavior · Quantitative Biology 2021-11-24 Hanan Dreiwi , Flavia Feliciangeli , Mario Castro , Grant Lythe , Carmen Molina-París , Martín López-García

Flowing blood displays a phenomenon called margination, in which leukocytes and platelets are preferentially found near blood vessel walls, while erythrocytes are depleted from these regions. Here margination is investigated using direct…

Soft Condensed Matter · Physics 2012-09-05 Amit Kumar , Michael D. Graham

We apply a recently developed model of cytoskeletal force generation to study a cell intrinsic contractility, as well as its response to external loading. The model is based on a non-equilibrium thermodynamic treatment of the…

Subcellular Processes · Quantitative Biology 2015-06-19 Mirko Maraldi , Clara Valero , Krishna Garikipati

Understanding to what extent stem cell potential is a cell-intrinsic property, or an emergent behavior coming from global tissue dynamics and geometry, is a key outstanding question of systems and stem cell biology. Here, we propose a…

Stall cells are spanwise-periodic flow structures that spontaneously form on airfoils operating near stall, fundamentally altering the aerodynamic loading distribution. Despite decades of experimental observations, a complete theoretical…

Fluid Dynamics · Physics 2026-02-11 Rishabh Mishra , Emmanuel Guilmineau , Ingrid Neunaber , Caroline Braud

The shear viscosity in the dilute regime of a model for confined granular matter is studied by simulations and kinetic theory. The model consists on projecting into two dimensions the motion of vibrofluidized granular matter in shallow…

Statistical Mechanics · Physics 2015-06-22 Rodrigo Soto , Dino Risso , Ricardo Brito

The multi-cellular hydrodynamic interactions play a critical role in the phenomenology of blood flow in the microcirculation. A fast algorithm has been developed to simulate large numbers of cells modeled as elastic thin membranes. For red…

Fluid Dynamics · Physics 2008-10-14 Amir H. G. Isfahani , Hong Zhao , Jonathan B. Freund

The conventional no-slip boundary condition leads to a non-integrable stress singularity at a contact line. This is a main challenge in numerical simulations of two-phase flows with moving contact lines. We derive a two-dimensional…

Fluid Dynamics · Physics 2019-05-23 Hanna Holmgren , Gunilla Kreiss

A fundamental step in the rational design of vascular targeted particles is the firm adhesion at the blood vessel walls. Here, a combined Lattice Boltzmann Immersed Boundary model is presented for predicting the near wall dynamics of…

Fluid Dynamics · Physics 2018-08-07 A. Coclite , H. Mollica , S. Ranaldo , G. Pascazio , M. D. De Tullio , P. Decuzzi

Tuning cell rearrangements is essential in collective cell movement that underlies cancer progression, wound repair, and embryonic development. A key question is how tissue material properties and morphology emerge from cellular factors…

Biological Physics · Physics 2025-07-15 Soumyadipta Ray , Santidan Biswas , Dipjyoti Das

We study a simplified stochastic model for the vascularization of a growing tumor, incorporating the formation of new blood vessels at the tumor periphery as well as their regression in the tumor center. The resulting morphology of the…

Cell Behavior · Quantitative Biology 2009-09-16 Raja Paul

A noteworthy aspect in blood flow modeling is the definition of the mechanical interaction between the fluid flow and the biological structure that contains it, namely the vessel wall. It has been demonstrated that the addition of a viscous…

Fluid Dynamics · Physics 2022-06-14 Francesco Piccioli , Giulia Bertaglia , Alessandro Valiani , Valerio Caleffi

Continuum models for the spatial dynamics of growing cell populations have been widely used to investigate the mechanisms underpinning tissue development and tumour invasion. These models consist of nonlinear partial differential equations…

Tissues and Organs · Quantitative Biology 2019-07-15 Mark AJ Chaplain , Tommaso Lorenzi , Fiona R Macfarlane

We study numerically shear banded flow in planar and curved Couette geometries. Our aim is to explain two recent observations in shear banding systems of roll cells stacked in the vorticity direction, associated with an undulation of the…

Soft Condensed Matter · Physics 2015-05-14 Suzanne M. Fielding

The velocity of a two-dimensional aqueous foam has been measured as it flows through two parallel channels, at a constant overall volumetric flow rate. The flux distribution between the two channels is studied as a function of the ratio of…

Fluid Dynamics · Physics 2013-09-11 Sian A. Jones , Benjamin Dollet , Yves Méheust , Simon J. Cox , Isabelle Cantat

This manuscript uses a statistical mechanical approach to study the effect of the adhesion, through MOCA protein, on cell locomotion. The MOCA protein regulates cell-cell adhesion, and we explore its potential role in the cell movement. We…

Cell Behavior · Quantitative Biology 2007-05-23 L. Diambra , L. C. Cintra , D. Schubert , L. da F. Costa

We address a quasi-stationary fluid-structure interaction problem coupled with cell reactions and growth, which comes from the plaque formation during the stage of the atherosclerotic lesion in human arteries. The blood is modeled by the…

Analysis of PDEs · Mathematics 2023-10-10 Helmut Abels , Yadong Liu

A general phenomenological reaction-diffusion model for flow-induced phase transitions in complex fluids is presented. The model consists of an equation of motion for a nonconserved composition variable, coupled to a Newtonian stress…

Soft Condensed Matter · Physics 2009-11-07 J. L. Goveas , P. D. Olmsted

A new vehicular traffic flow model based on a stochastic jump process in vehicle acceleration and braking is introduced. It is based on a master equation for the single car probability density in space, velocity and acceleration with an…

Other Condensed Matter · Physics 2009-11-10 K. Thomas Waldeer

We discuss several continuum cell-cell adhesion models based on the underlying microscopic assumptions. We propose an improvement on these models leading to sharp fronts and intermingling invasion fronts between different cell type…

Cell Behavior · Quantitative Biology 2019-01-11 Jose A. Carrillo , Hideki Murakawa , Makoto Sato , Hideru Togashi , Olena Trush