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The wide array of currently available genomes display a wonderful diversity in size, composition and structure with many more to come thanks to several global biodiversity genomics initiatives starting in recent years. However, sequencing…
Word2Vec is a widely used algorithm for extracting low-dimensional vector representations of words. It generated considerable excitement in the machine learning and natural language processing (NLP) communities recently due to its…
Conventional embedding methods directly associate each symbol with a continuous embedding vector, which is equivalent to applying a linear transformation based on a "one-hot" encoding of the discrete symbols. Despite its simplicity, such…
Word embedding or vector representation of word holds syntactical and semantic characteristics of a word which can be an informative feature for any machine learning-based models of natural language processing. There are several deep…
Recent work has begun exploring neural acoustic word embeddings---fixed-dimensional vector representations of arbitrary-length speech segments corresponding to words. Such embeddings are applicable to speech retrieval and recognition tasks,…
Network embeddings have become very popular in learning effective feature representations of networks. Motivated by the recent successes of embeddings in natural language processing, researchers have tried to find network embeddings in…
Learning a high-dimensional dense representation for vocabulary terms, also known as a word embedding, has recently attracted much attention in natural language processing and information retrieval tasks. The embedding vectors are typically…
Schmidt decomposition of a vector can be understood as writing the singular value decomposition (SVD) in vector form. A vector can be written as a linear combination of tensor product of two dimensional vectors by recursively applying…
In this paper, we investigate the suitability of state-of-the-art representation learning methods to the analysis of behavioral similarity of moving individuals, based on CDR trajectories. The core of the contribution is a novel…
Recent advances in neural word embedding provide significant benefit to various information retrieval tasks. However as shown by recent studies, adapting the embedding models for the needs of IR tasks can bring considerable further…
Recent works on word representations mostly rely on predictive models. Distributed word representations (aka word embeddings) are trained to optimally predict the contexts in which the corresponding words tend to appear. Such models have…
Embedding models can generate high-dimensional vectors whose similarity reflects semantic affinities. Thus, accurately and timely retrieving those vectors in a large collection that are similar to a given query has become a critical…
This paper demonstrates the utility of organized numerical representations of genes in research involving flat string gene formats (i.e., FASTA/FASTQ5). FASTA/FASTQ files have several current limitations, such as their large file sizes,…
An experimental approach to studying the properties of word embeddings is proposed. Controlled experiments, achieved through modifications of the training corpus, permit the demonstration of direct relations between word properties and word…
To improve the generalization of the representations for natural language processing tasks, words are commonly represented using vectors, where distances among the vectors are related to the similarity of the words. While word2vec, the…
The computation of distance measures between nodes in graphs is inefficient and does not scale to large graphs. We explore dense vector representations as an effective way to approximate the same information: we introduce a simple yet…
Recent studies demonstrated the eligibility of convolutional neural networks (CNNs) for solving the image registration problem. CNNs enable faster transformation estimation and greater generalization capability needed for better support…
Word2Vec is a prominent model for natural language processing (NLP) tasks. Similar inspiration is found in distributed embeddings for new state-of-the-art (SotA) deep neural networks. However, wrong combination of hyper-parameters can…
This project intends to study the image representation based on attention mechanism and multimodal data. By adding multiple pattern layers to the attribute model, the semantic and hidden layers of image content are integrated. The word…
Word2vec (Mikolov et al., 2013) has proven to be successful in natural language processing by capturing the semantic relationships between different words. Built on top of single-word embeddings, paragraph vectors (Le and Mikolov, 2014)…