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Many biological, technological, and social systems can be effectively described as networks of interacting subsystems. Typically, these networks are not isolated objects, but interact with their environment through both signals and…

Systems and Control · Electrical Eng. & Systems 2026-01-06 Amirhossein Nazerian , Malbor Asllani , Melvyn Tyloo , Wai Lim Ku , Francesco Sorrentino

Advances in neural recording methods enable sampling from populations of thousands of neurons during the performance of behavioral tasks, raising the question of how recorded activity relates to the theoretical models of computations…

Neurons and Cognition · Quantitative Biology 2020-07-01 Audrey J. Sederberg , Ilya Nemenman

Cortical networks are strongly recurrent, and neurons have intrinsic temporal dynamics. This sets them apart from deep feed-forward networks. Despite the tremendous progress in the application of feed-forward networks and their theoretical…

Disordered Systems and Neural Networks · Physics 2021-07-14 Sandra Nestler , Christian Keup , David Dahmen , Matthieu Gilson , Holger Rauhut , Moritz Helias

Currently, the most successful learning models in computer vision are based on learning successive representations followed by a decision layer. This is usually actualized through feedforward multilayer neural networks, e.g. ConvNets, where…

Computer Vision and Pattern Recognition · Computer Science 2017-08-22 Amir R. Zamir , Te-Lin Wu , Lin Sun , William Shen , Jitendra Malik , Silvio Savarese

Cognitive function is driven by dynamic interactions between large-scale neural circuits or networks, enabling behavior. Fundamental principles constraining these dynamic network processes have remained elusive. Here we use network control…

Neurons and Cognition · Quantitative Biology 2015-10-28 Shi Gu , Fabio Pasqualetti , Matthew Cieslak , Scott T. Grafton , Danielle S. Bassett

Learning depends on changes in synaptic connections deep inside the brain. In multilayer networks, these changes are triggered by error signals fed back from the output, generally through a stepwise inversion of the feedforward processing…

Neurons and Cognition · Quantitative Biology 2021-01-05 William F. Podlaski , Christian K. Machens

The activation/repression of a given gene is typically regulated by multiple transcription factors (TFs) that bind at the gene regulatory region and recruit RNA polymerase (RNAP). The interactions between the promoter region and TFs and…

Molecular Networks · Quantitative Biology 2009-07-14 Herbert Sauro , Song Yang

An object-oriented approach to implementing artificial neural networks is introduced in this article. The networks obtained in this way are highly connected in that they admit edges between nodes in any layers of the network, and dynamic,…

Machine Learning · Computer Science 2023-02-20 Clint van Alten

Associative memory has been a prominent candidate for the computation performed by the massively recurrent neocortical networks. Attractor networks implementing associative memory have offered mechanistic explanation for many cognitive…

Neural and Evolutionary Computing · Computer Science 2022-09-07 Naresh Balaji Ravichandran , Anders Lansner , Pawel Herman

The response of complex networks to perturbations is of utmost importance in areas as diverse as ecosystem management, emergency response, and cell reprogramming. A fundamental property of networks is that the perturbation of one node can…

Molecular Networks · Quantitative Biology 2011-05-20 Sean P. Cornelius , William L. Kath , Adilson E. Motter

Entrainment of randomly coupled oscillator networks by periodic external forcing applied to a subset of elements is numerically and analytically investigated. For a large class of interaction functions, we find that the entrainment window…

Disordered Systems and Neural Networks · Physics 2015-06-25 Hiroshi Kori , Alexander S. Mikhailov

Artificial neurons with arbitrarily complex internal structure are introduced. The neurons can be described in terms of a set of internal variables, a set activation functions which describe the time evolution of these variables and a set…

Neural and Evolutionary Computing · Computer Science 2007-05-23 G. A. Kohring

We investigate bifurcations in feedforward coupled cell networks. Feedforward structure (the absence of feedback) can be defined by a partial order on the cells. We use this property to study generic one-parameter steady state bifurcations…

Dynamical Systems · Mathematics 2022-03-14 Sören von der Gracht , Eddie Nijholt , Bob Rink

Network inference, the task of reconstructing interactions in a complex system from experimental observables, is a central yet extremely challenging problem in systems biology. While much progress has been made in the last two decades,…

Quantitative Methods · Quantitative Biology 2024-09-12 Stephen Y Zhang

Inhibition is considered to shape neural activity, and broaden its pattern repertoire. In the sensory organs, where the anatomy of neural circuits is highly structured, lateral inhibition sharpens contrast among stimulus properties. The…

Neurons and Cognition · Quantitative Biology 2018-09-18 Netta Haroush , Shimon Marom

Preceptron model updating with back propagation has become the routine of deep learning. Continuous feed forward procedure is required in order for backward propagate to function properly. Doubting the underlying physical interpretation on…

Signal Processing · Electrical Eng. & Systems 2020-10-19 Shirui Tang

Recurrent neural networks can learn complex transduction problems that require maintaining and actively exploiting a memory of their inputs. Such models traditionally consider memory and input-output functionalities indissolubly entangled.…

Machine Learning · Computer Science 2018-11-09 Davide Bacciu , Antonio Carta , Alessandro Sperduti

A model of sensory information processing is presented. The model assumes that learning of internal (hidden) generative models, which can predict the future and evaluate the precision of that prediction, is of central importance for…

Neural and Evolutionary Computing · Computer Science 2007-05-23 Andras Lorincz

Distributed networks of brain areas interact with one another in a time-varying fashion to enable complex cognitive and sensorimotor functions. Here we use novel network analysis algorithms to test the recruitment and integration of…

Neurons and Cognition · Quantitative Biology 2014-03-25 Danielle S. Bassett , Muzhi Yang , Nicholas F. Wymbs , Scott T. Grafton

Unknown nonlinear dynamics can limit the performance of model-based feedforward control. The aim of this paper is to develop a feedforward control framework for systems with unknown, typically nonlinear, dynamics. To address the unknown…

Systems and Control · Electrical Eng. & Systems 2023-03-31 Johan Kon , Dennis Bruijnen , Jeroen van de Wijdeven , Marcel Heertjes , Tom Oomen