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As a counterpoint to classical stochastic particle methods for diffusion, we develop a deterministic particle method for linear and nonlinear diffusion. At first glance, deterministic particle methods are incompatible with diffusive partial…
Brownian Dynamics algorithms are widely used for simulating soft-matter and biochemical systems. In recent times, their application has been extended to the simulation of coarse-grained models of cellular networks in simple organisms. In…
A linearized numerical scheme is proposed to solve the nonlinear time fractional parabolic problems with time delay. The scheme is based on the standard Galerkin finite element method in the spatial direction, the fractional Crank-Nicolson…
We consider the numerical solution of time-dependent space tempered fractional diffusion equations. The use of Crank-Nicolson in time and of second-order accurate tempered weighted and shifted Gr\"unwald difference in space leads to dense…
We find a numerical self-consistent stellar model by finding the distribution function of a thin disk that satisfies simultaneously the Fokker-Planck and Poisson equations. The solution of the Fokker-Planck equation is found by a direct…
In recent years, kinetic equations have been used to model many social phenomena. A key feature of these models is that transition rate kernels involve Dirac delta functions, which capture sudden, discontinuous state changes. Here, we study…
This paper treats the solvability of a semilinear reaction-diffusion system, which incorporates transport (diffusion) and reaction effects emerging from two separated spatial scales: $x$ - macro and $y$ - micro. The system's origin connects…
This paper represents a mixed numerical method for the multi-resolution solution of non-linear partial differential equations based on B-Spline wavelets. The method is based on a second-order finite difference formula combined with the…
We study the convergence of the new family of mimetic finite difference schemes for linear diffusion problems recently proposed in [38]. In contrast to the conventional approach, the diffusion coefficient enters both the primary mimetic…
Computational Fluid Dynamics (CFD) simulations are used for many air flow simulations including road vehicle aerodynamics. Numerical diffusion occurs when local flow direction is not aligned with the mesh lines and when there is a non-zero…
In this work, we reformulate the relativistic BDNK (Bemfica-Disconzi-Noronha-Kovtun) diffusion equation in flux-conservative form, and solve the resulting equations in $(1+1)$D using both a second-order Kurganov-Tadmor finite volume scheme…
In this work, we have discretized a system of time-dependent nonlinear convection-diffusion-reaction equations with the virtual element method over the spatial domain and the Euler method for the temporal interval. For the nonlinear…
In this paper, a second order finite difference scheme is investigated for time-dependent one-side space fractional diffusion equations with variable coefficients. The existing schemes for the equation with variable coefficients have…
In this paper, we study a tensor-based method for the numerical solution of a class of diffusion--reaction equations defined on spatial domains that admit common curvilinear coordinate representations. Typical examples in 2D include disks…
We consider a quasilinear degenerate diffusion-reaction system that describes biofilm formation. The model exhibits two non-linear effects: a power law degeneracy as one of the dependent variables vanishes and a super diffusion singularity…
In this paper we propose and analyze a (temporally) third order accurate backward differentiation formula (BDF) numerical scheme for the no-slope-selection (NSS) equation of the epitaxial thin film growth model, with Fourier pseudo-spectral…
Solid fuel ignition models, for which the dynamics of the temperature is independent of the single-species mass fraction, attempt to follow the dynamics of an explosive event. Such models may take the form of singular, degenerate,…
We present a tensor-decomposition method to solve the Boltzmann transport equation (BTE) in the Bhatnagar-Gross-Krook approximation. The method represents the six-dimensional BTE as a set of six one-dimensional problems, which are solved…
This paper, as the sequel to previous work, develops numerical schemes for fractional diffusion equations on a two-dimensional finite domain with triangular meshes. We adopt the nodal discontinuous Galerkin methods for the full spatial…
This paper studies the shallow Ritz method for solving the one-dimensional diffusion problem. It is shown that the shallow Ritz method improves the order of approximation dramatically for non-smooth problems. To realize this optimal or…