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Distance measures play an important role in shape classification and data analysis problems. Topological distances based on Reeb graphs and persistence diagrams have been employed to obtain effective algorithms in shape matching and scalar…

Machine Learning · Computer Science 2023-03-07 Yashwanth Ramamurthi , Amit Chattopadhyay

Recent works have demonstrated promising performances of neural networks on hyperbolic spaces and symmetric positive definite (SPD) manifolds. These spaces belong to a family of Riemannian manifolds referred to as symmetric spaces of…

Machine Learning · Statistics 2026-01-06 Xuan Son Nguyen , Shuo Yang , Aymeric Histace

Graph embeddings have emerged as a powerful tool for representing complex network structures in a low-dimensional space, enabling the use of efficient methods that employ the metric structure in the embedding space as a proxy for the…

Social and Information Networks · Computer Science 2024-04-18 Radosław Nowak , Adam Małkowski , Daniel Cieślak , Piotr Sokół , Paweł Wawrzyński

Understanding brain connectivity has become one of the most important issues in neuroscience. But connectivity data can reflect either the functional relationships of the brain activities or the anatomical properties between brain areas.…

Neurons and Cognition · Quantitative Biology 2015-04-13 Tiago Simas , Mario Chavez , Pablo Rodriguez , Albert Diaz-Guilera

In the past two decades, significant advances have been made in understanding the structural and functional properties of biological networks, via graph-theoretic analysis. In general, most graph-theoretic studies are conducted in the…

Physics and Society · Physics 2013-10-21 Michelle Rudolph-Lilith , Lyle E. Muller

Although neural networks are capable of reaching astonishing performances on a wide variety of contexts, properly training networks on complicated tasks requires expertise and can be expensive from a computational perspective. In industrial…

Machine Learning · Statistics 2021-05-11 Théo Lacombe , Yuichi Ike , Mathieu Carriere , Frédéric Chazal , Marc Glisse , Yuhei Umeda

Graph similarity metrics serve far-ranging purposes across many domains in data science. As graph datasets grow in size, scientists need comparative tools that capture meaningful differences, yet are lightweight and scalable. Graph Relative…

Combinatorics · Mathematics 2019-08-08 Sinan G. Aksoy , Kathleen E. Nowak , Stephen J. Young

The network architecture of the human brain has become a feature of increasing interest to the neuroscientific community, largely because of its potential to illuminate human cognition, its variation over development and aging, and its…

Neurons and Cognition · Quantitative Biology 2016-11-07 Richard F. Betzel , Danielle S. Bassett

We propose a novel measure of degree heterogeneity, for unweighted and undirected complex networks, which requires only the degree distribution of the network for its computation. We show that the proposed measure can be applied to all…

Physics and Society · Physics 2017-10-03 Rinku Jacob , K. P. Harikrishnan , R. Misra , G. Ambika

We define a metric---the network Gromov-Wasserstein distance---on weighted, directed networks that is sensitive to the presence of outliers. In addition to proving its theoretical properties, we supply network invariants based on optimal…

Discrete Mathematics · Computer Science 2019-09-05 Samir Chowdhury , Facundo Mémoli

Unravelling the block structure of a network is critical for studying macroscopic features and community-level dynamics. The weighted stochastic block model (WSBM), a variation of the traditional stochastic block model, is designed for…

Dynamical Systems · Mathematics 2021-08-04 Wooseok Jung

We study typical distances in a geometric random graph on the hyperbolic plane. Introduced by Krioukov et al.~\cite{ar:Krioukov} as a model for complex networks, $N$ vertices are drawn randomly within a bounded subset of the hyperbolic…

Combinatorics · Mathematics 2017-08-04 Mohammed Amin Abdullah , Michel Bode , Nikolaos Fountoulakis

Finding the underlying relationships among multiple imaging modalities in a coherent fashion is one of challenging problems in the multimodal analysis. In this study, we propose a novel multimodal network approach based on multidi-…

Quantitative Methods · Quantitative Biology 2016-02-26 Hyekyoung Lee , Hyejin Kang , Moo K. Chung , Seonhee Lim , Bung-Nyun Kim , Dong Soo Lee

Measuring similarity between complex objects is a fundamental task in many scientific fields. When objects are represented as graphs, graph similarity/distance measures offer a powerful framework for quantifying structural resemblance.…

Combinatorics · Mathematics 2025-09-30 Matthias Dehmer , Izudin Redžepović , Niko Tratnik , Petra Žigert Pleteršek

The irreducible complexity of natural phenomena has led Graph Neural Networks to be employed as a standard model to perform representation learning tasks on graph-structured data. While their capacity to capture local and global patterns is…

Machine Learning · Computer Science 2024-02-13 Lorenzo Giusti

This paper, based on $k$-NN graph, presents symmetric $(k,j)$-NN graph $(1 \leq j < k)$, a brand new topology which could be adopted by a series of network-based structures. We show that the $k$ nearest neighbors of a node exert disparate…

Networking and Internet Architecture · Computer Science 2014-10-30 Jie Ding , Min-Yi Wang , Qiao Wang , Xin-Shan Zhu

Interactions and relations between objects may be pairwise or higher-order in nature, and so network-valued data are ubiquitous in the real world. The "space of networks", however, has a complex structure that cannot be adequately described…

Metric Geometry · Mathematics 2024-12-09 Stephen Y Zhang , Fangfei Lan , Youjia Zhou , Agnese Barbensi , Michael P H Stumpf , Bei Wang , Tom Needham

Mild cognitive impairment (MCI) is characterized by subtle changes in cognitive functions, often associated with disruptions in brain connectivity. The present study introduces a novel fine-grained analysis to examine topological…

Computer Vision and Pattern Recognition · Computer Science 2024-08-29 Ninad Aithal , Debanjali Bhattacharya , Neelam Sinha , Thomas Gregor Issac

Restricted Boltzmann Machines (RBMs) and models derived from them have been successfully used as basic building blocks in deep artificial neural networks for automatic features extraction, unsupervised weights initialization, but also as…

Neural and Evolutionary Computing · Computer Science 2016-07-20 Decebal Constantin Mocanu , Elena Mocanu , Phuong H. Nguyen , Madeleine Gibescu , Antonio Liotta

For many important network types (e.g., sensor networks in complex harsh environments and social networks) physical coordinate systems (e.g., Cartesian), and physical distances (e.g., Euclidean), are either difficult to discern or…

Social and Information Networks · Computer Science 2023-12-05 Anura P. Jayasumana , Randy Paffenroth , Gunjan Mahindre , Sridhar Ramasamy , Kelum Gajamannage
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