English
Related papers

Related papers: Large-scale network motif analysis using compressi…

200 papers

In the last decade, network science has shed new light both on the structural (anatomical) and on the functional (correlations in the activity) connectivity among the different areas of the human brain. The analysis of brain networks has…

Physics and Society · Physics 2017-04-18 Federico Battiston , Vincenzo Nicosia , Mario Chavez , Vito Latora

We introduce graph motif parameters, a class of graph parameters that depend only on the frequencies of constant-size induced subgraphs. Classical works by Lov\'asz show that many interesting quantities have this form, including, for fixed…

Data Structures and Algorithms · Computer Science 2017-05-05 Radu Curticapean , Holger Dell , Dániel Marx

Subgraphs such as cliques, loops and stars form crucial connections in the topologies of real-world networks. Random graph models provide estimates for how often certain subgraphs appear, which in turn can be tested against real-world…

Social and Information Networks · Computer Science 2021-11-03 Johan S. H. van Leeuwaarden , Clara Stegehuis

Complex networks evolve and vary their structure as time goes by. In particular, the links in those networks have both a sign and a directionality. To understand their structural principles, we measure the network motifs, which are patterns…

Physics and Society · Physics 2023-06-28 Youngjai Park , Mi Jin Lee , Seung-Woo Son

The graph structure is a commonly used data storage mode, and it turns out that the low-dimensional embedded representation of nodes in the graph is extremely useful in various typical tasks, such as node classification, link prediction ,…

Social and Information Networks · Computer Science 2020-08-03 Xing Li , Wei Wei , Xiangnan Feng , Xue Liu , Zhiming Zheng

Given a query graph that represents a pattern of interest, the emerging pattern detection problem can be viewed as a continuous query problem on a dynamic graph. We present an incremental algorithm for continuous query processing on dynamic…

Databases · Computer Science 2014-07-15 Sutanay Choudhury , Lawrence Holder , George Chin , Patrick Mackey , Khushbu Agarwal , John Feo

The connectivity structure of graphs is typically related to the attributes of the nodes. In social networks for example, the probability of a friendship between two people depends on their attributes, such as their age, address, and…

Social and Information Networks · Computer Science 2020-02-06 Junning Deng , Bo Kang , Jefrey Lijffijt , Tijl De Bie

Exchangeable random graphs, which include some of the most widely studied network models, have emerged as the mainstay of statistical network analysis in recent years. Graphons, which are the central objects in graph limit theory, provide a…

Statistics Theory · Mathematics 2024-09-17 Anirban Chatterjee , Soham Dan , Bhaswar B. Bhattacharya

We consider the problem of sampling and approximately counting an arbitrary given motif $H$ in a graph $G$, where access to $G$ is given via queries: degree, neighbor, and pair, as well as uniform edge sample queries. Previous algorithms…

Data Structures and Algorithms · Computer Science 2021-07-20 Amartya Shankha Biswas , Talya Eden , Ronitt Rubinfeld

Network moments--rescaled counts of motifs such as stars and triangles--are fundamental summaries of network structure, widely used in goodness-of-fit testing, model selection, and network comparison. While the univariate distribution of a…

Methodology · Statistics 2026-04-14 Mingyu Qi , Chen-Wei Hua , Tianxi Li , Wen Zhou

Interpreting a node-link graph is enhanced if similar subgraphs (or motifs) are depicted in a similar manner; that is, they have the same visual form. Small motifs within graphs may be perceived to be identical when they are structurally…

Human-Computer Interaction · Computer Science 2023-08-11 Jacob Miller , Mohammad Ghoniem , Hsiang-Yun Wu , Helen C. Purchase

All networks can be analyzed at multiple scales. A higher scale of a network is made up of macro-nodes: subgraphs that have been grouped into individual nodes. Recasting a network at higher scales can have useful effects, such as decreasing…

Social and Information Networks · Computer Science 2022-02-18 Ross Griebenow , Brennan Klein , Erik Hoel

Dense subgraph extraction is a fundamental problem in graph analysis and data mining, aimed at identifying cohesive and densely connected substructures within a given graph. It plays a crucial role in various domains, including social…

Data Structures and Algorithms · Computer Science 2024-03-01 Chia-Yang Hung , Chih-Ya Shen

We generalize a sampling algorithm for lattice animals (connected clusters on a regular lattice) to a Monte Carlo algorithm for `graph animals', i.e. connected subgraphs in arbitrary networks. As with the algorithm in [N. Kashtan et al.,…

Molecular Networks · Quantitative Biology 2009-11-13 Kim Baskerville , Peter Grassberger , Maya Paczuski

We propose a method for obtaining parsimonious decompositions of networks into higher order interactions which can take the form of arbitrary motifs.The method is based on a class of analytically solvable generative models, where vertices…

Social and Information Networks · Computer Science 2024-04-03 Anatol E. Wegner , Sofia C. Olhede

Dynamic network data analysis requires joint modelling individual snapshots and time dynamics. This paper proposes a new two-way heterogeneity model towards this goal. The new model equips each node of the network with two heterogeneity…

Methodology · Statistics 2024-04-15 Binyan Jiang , Chenlei Leng , Ting Yan , Qiwei Yao , Xinyang Yu

We discuss the problem of extending data mining approaches to cases in which data points arise in the form of individual graphs. Being able to find the intrinsic low-dimensionality in ensembles of graphs can be useful in a variety of…

Social and Information Networks · Computer Science 2016-12-12 Karthikeyan Rajendran , Assimakis A. Kattis , Alexander Holiday , Risi Kondor , Ioannis G. Kevrekidis

Network architecture design is very important for the optimization of industrial networks. The type of network architecture can be divided into small-scale network and large-scale network according to its scale. Graph theory is an efficient…

Social and Information Networks · Computer Science 2022-09-20 Chao Dong , Xiaoxiong Xiong , Qiulin Xue , Zhengzhen Zhang , Kai Niu , Ping Zhang

A motif is a frequently occurring subgraph of a given directed or undirected graph $G$. Motifs capture higher order organizational structure of $G$ beyond edge relationships, and, therefore, have found wide applications such as in graph…

Data Structures and Algorithms · Computer Science 2022-09-13 Michael Kapralov , Mikhail Makarov , Sandeep Silwal , Christian Sohler , Jakab Tardos

The discovery of time series motifs has emerged as one of the most useful primitives in time series data mining. Researchers have shown its utility for exploratory data mining, summarization, visualization, segmentation, classification,…

Machine Learning · Computer Science 2018-02-16 Yan Zhu , Abdullah Mueen , Eamonn Keogh