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A crop can be represented as a biotechnical system in which components are either chosen (cultivar, management) or given (soil, climate) and whose combination generates highly variable stress patterns and yield responses. Here, we used…

Populations and Evolution · Quantitative Biology 2014-03-13 Pierre Casadebaig , Ronan Trépos , Victor Picheny , Nicolas B. Langlade , Patrick Vincourt , Philippe Debaeke

Accounting for the annual climatic variability is a well-known issue for simulation-based studies of environmental models. It often requires intensive sampling (e.g., averaging the simulation outputs over many climatic series), which…

Optimization and Control · Mathematics 2015-09-21 Victor Picheny , Ronan Trépos , Bastien Poublan , Pierre Casadebaig

Numerical plant models can predict the outcome of plant traits modifications resulting from genetic variations, on plant performance, by simulating physiological processes and their interaction with the environment. Optimization methods…

Quantitative Methods · Quantitative Biology 2017-06-20 Victor Picheny , Pierre Casadebaig , Ronan Trépos , Robert Faivre , David Da Silva , Patrick Vincourt , Evelyne Costes

The automatic measurement of developmental and physiological responses of sunflowers to water stress represents an applied challenge for a better knowledge of the varieties available to growers, but also a fundamental one for identifying…

Image and Video Processing · Electrical Eng. & Systems 2023-07-24 Pierre Casadebaig , Nicolas Blanchet , Nicolas Bernard Langlade

Understanding the genetic basis of phenotypic plasticity is crucial for predicting and managing climate change effects on wild plants and crops. Here, we combined crop modeling and quantitative genetics to study the genetic control of oil…

Plant breeding programs use data obtained from multi-environment selection experiments to produce improved varieties with the ultimate aim of maintaining high levels of genetic gain. Selection accuracy can be improved with the use of…

Methodology · Statistics 2026-05-13 Brian R Cullis , Alison B Smith , David GD Hughes , David Butler

A crop can be viewed as a complex system with outputs (e.g. yield) that are affected by inputs of genetic, physiology, pedo-climatic and management information. Application of numerical methods for model exploration assist in evaluating the…

Quantitative Methods · Quantitative Biology 2016-01-26 Pierre Casadebaig , Bangyou Zheng , Scott Chapman , Neil Huth , Robert Faivre , Karine Chenu

Sunflower (Helianthus annuus L.) grain and oil quality are defined by grain weight and oil percentage, oil fatty acid composition and the amount of antioxidants. The aim of this work was to establish and validate a simple model, based on…

Quantitative Methods · Quantitative Biology 2017-07-04 Gustavo A. Pereyra-Irujo , Luis A. N. Aguirrezábal

Plant breeding and variety trials are usually conducted in multiple environments sampled from a defined target population of environments in order to characterize the performance of breeding lines or varieties. When the population is large…

Applications · Statistics 2026-05-01 Maryna Prus , Lenka Filová , Hans-Peter Piepho , Waqas Ahmed Malik

Accurate prediction of crop states (e.g., phenology stages and cold hardiness) is essential for timely farm management decisions such as irrigation, fertilization, and canopy management to optimize crop yield and quality. While traditional…

Artificial Intelligence · Computer Science 2026-05-20 William Solow , Paola Pesantez-Cabrera , Markus Keller , Lav Khot , Sandhya Saisubramanian , Alan Fern

Growing mixtures of annual arable crop species or genotypes is a promising way to improve crop production without increasing agricultural inputs. To design optimal crop mixtures, choices of species, genotypes, sowing proportion, plant…

Modern agriculture heavily relies on Site-Specific Farm Management practices, necessitating accurate detection, localization, and quantification of crops and weeds in the field, which can be achieved using deep learning techniques. In this…

Computer Vision and Pattern Recognition · Computer Science 2024-06-17 Muhammad Hamza Asad , Saeed Anwar , Abdul Bais

Eradicating hunger and malnutrition is a key development goal of the 21st century. We address the problem of optimally identifying seed varieties to reliably increase crop yield within a risk-sensitive decision-making framework.…

Machine Learning · Computer Science 2017-11-17 Huaiyang Zhong , Xiaocheng Li , David Lobell , Stefano Ermon , Margaret L. Brandeau

Crop management involves a series of critical, interdependent decisions or actions in a complex and highly uncertain environment, which exhibit distinct spatial and temporal variations. Managing resource inputs such as fertilizer and…

Crop yield prediction typically involves the utilization of either theory-driven process-based crop growth models, which have proven to be difficult to calibrate for local conditions, or data-driven machine learning methods, which are known…

Optimizing management practices and selecting the best cultivar for planting play a significant role in increasing agricultural food production and decreasing environmental footprint. In this study, we develop optimization frameworks under…

Optimization and Control · Mathematics 2022-08-10 Faezeh Akhavizadegan , Javad Ansarifar , Lizhi Wang , Sotirios V. Archontoulis

Accurate prediction of grape phenology is essential for timely vineyard management decisions, such as scheduling irrigation and fertilization, to maximize crop yield and quality. While traditional biophysical models calibrated on historical…

Machine Learning · Computer Science 2025-08-07 William Solow , Sandhya Saisubramanian

Agriculture constitutes a primary source of food production, economic growth and employment in India, but the sector is confronted with low farm productivity and yields aggravated by increased pressure on natural resources and adverse…

Machine Learning · Computer Science 2025-05-28 Steven Sam , Silima Marshal DAbreo

As the world population increases and arable land decreases, it becomes vital to improve the productivity of the agricultural land available. Given the weather and soil properties, farmers need to take critical decisions such as which seed…

Computer Vision and Pattern Recognition · Computer Science 2017-10-26 Gunjan Sehgal , Bindu Gupta , Kaushal Paneri , Karamjit Singh , Geetika Sharma , Gautam Shroff

In variety testing, multi-environment trials (MET) are essential for evaluating the genotypic performance of crop plants. A persistent challenge in the statistical analysis of MET data is the estimation of variance components, which are…

Methodology · Statistics 2026-04-20 Stephan Bark , Waqas Ahmed Malik , Maryna Prus , Hans-Peter Piepho , Volker Schmid
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