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The AMIDER, Advanced Multidisciplinary Integrated-Database for Exploring new Research, is a newly developed research data catalog to demonstrate an advanced database application. AMIDER is characterized as a multidisciplinary database…

One common way to speed up the find operation within a set of text files involves a trigram index. This structure is merely a map from a trigram (sequence consisting of three characters) to a set of files which contain it. When searching…

Software Engineering · Computer Science 2024-03-07 Zakhar Iakovlev , Alexey Chulkov , Nikita Golikov , Vyacheslav Lukianov , Nikita Zinoviev , Dmitry Ivanov , Vitaly Aksenov

Entity-oriented search deals with a wide variety of information needs, from displaying direct answers to interacting with services. In this work, we aim to understand what are prominent entity-oriented search intents and how they can be…

Information Retrieval · Computer Science 2018-03-23 Darío Garigliotti , Krisztian Balog

Interactive visualizations for exploring and retrieval have not yet become an integral part of digital libraries and information retrieval systems. We have integrated a set of interactive graphics in a real world social science digital…

Digital Libraries · Computer Science 2012-01-13 Daniel Hienert , Frank Sawitzki , Philipp Schaer , Philipp Mayr

Sparse vector Maximum Inner Product Search (MIPS) is crucial in multi-path retrieval for Retrieval-Augmented Generation (RAG). Recent inverted index-based and graph-based algorithms have achieved high search accuracy with practical…

ConIII (pronounced CON-ee) is an open-source Python project providing a simple interface to solving the pairwise and higher order Ising model and a base for extension to other maximum entropy models. We describe the maximum entropy problem…

Quantitative Methods · Quantitative Biology 2019-03-12 Edward D. Lee , Bryan C Daniels

Information access systems such as search engines and generative AI are central to how people seek, evaluate, and interpret information. Yet most systems are designed to optimise retrieval rather than to help users develop better search…

Human-Computer Interaction · Computer Science 2026-01-14 David Elsweiler

Exploratory visual data analysis tools empower data analysts to efficiently and intuitively explore data insights throughout the entire analysis cycle. However, the gap between common programmatic analysis (e.g., within computational…

Human-Computer Interaction · Computer Science 2025-01-08 Yue Yu , Leixian Shen , Fei Long , Huamin Qu , Hao Chen

We present gradiend, an open-source Python package that operationalizes the GRADIEND method for learning feature directions from factual-counterfactual MLM and CLM gradients in language models. The package provides a unified workflow for…

Computation and Language · Computer Science 2026-03-02 Jonathan Drechsel , Steffen Herbold

{\mu}Manager, an open-source microscopy acquisition software, has been an essential tool for many microscopy experiments over the past 15 years, but is not easy to use for experiments in which image acquisition and analysis are closely…

Quantitative Methods · Quantitative Biology 2024-02-12 Henry Pinkard , Nico Stuurman , Laura Waller

Utilizing Visualization-oriented Natural Language Interfaces (V-NLI) as a complementary input modality to direct manipulation for visual analytics can provide an engaging user experience. It enables users to focus on their tasks rather than…

Human-Computer Interaction · Computer Science 2022-02-07 Leixian Shen , Enya Shen , Yuyu Luo , Xiaocong Yang , Xuming Hu , Xiongshuai Zhang , Zhiwei Tai , Jianmin Wang

Pattern matching is a powerful tool for symbolic computations, based on the well-defined theory of term rewriting systems. Application domains include algebraic expressions, abstract syntax trees, and XML and JSON data. Unfortunately, no…

Programming Languages · Computer Science 2017-10-20 Manuel Krebber , Henrik Barthels , Paolo Bientinesi

Cybersecurity is a very challenging topic of research nowadays, as digitalization increases the interaction of people, software and services on the Internet by means of technology devices and networks connected to it. The field is broad and…

Artificial Intelligence · Computer Science 2021-07-02 Nuno Oliveira , Norberto Sousa , Isabel Praça

A compressed full-text self-index represents a text in a compressed form and still answers queries efficiently. This technology represents a breakthrough over the text indexing techniques of the previous decade, whose indexes required…

Data Structures and Algorithms · Computer Science 2007-12-21 Paolo Ferragina , Rodrigo Gonzalez , Gonzalo Navarro , Rossano Venturini

We present Lyncs-API, a Python API for Lattice QCD applications currently under development. Lyncs aims to bring several widely used libraries for Lattice QCD under a common framework. Lyncs flexibly links to libraries for CPUs and GPUs in…

High Energy Physics - Lattice · Physics 2022-01-12 Simone Bacchio , Jacob Finkenrath , Christodoulos Stylianou

Any cutting-edge scientific research project requires a myriad of computational tools for data generation, management, analysis and visualization. Python is a flexible and extensible scientific programming platform that offered the perfect…

Quantitative Methods · Quantitative Biology 2008-03-14 Julius B. Lucks

Search and information retrieval systems are becoming more expressive in interpreting user queries beyond the traditional weighted bag-of-words model of document retrieval. For example, searching for a flight status or a game score returns…

Human-Computer Interaction · Computer Science 2023-08-01 Vidya Setlur , Andriy Kanyuka , Arjun Srinivasan

We introduce GraSPy, a Python library devoted to statistical inference, machine learning, and visualization of random graphs and graph populations. This package provides flexible and easy-to-use algorithms for analyzing and understanding…

Social and Information Networks · Computer Science 2019-10-25 Jaewon Chung , Benjamin D. Pedigo , Eric W. Bridgeford , Bijan K. Varjavand , Hayden S. Helm , Joshua T. Vogelstein

The World Wide Web is a vast and continuously changing source of information where searching is a frequent, and sometimes critical, user task. Searching is not always the user's primary goal but an ancillary task that is performed to find…

Human-Computer Interaction · Computer Science 2019-05-27 Gabriela Bosetti , Sergio Firmenich , Alejandro Fernandez , Marco Winckler , Gustavo Rossi

The lack of open-source tools for hyperspectral data visualization and analysiscreates a demand for new tools. In this paper we present the new PlanetServer,a set of tools comprising a web Geographic Information System (GIS) and arecently…

Earth and Planetary Astrophysics · Physics 2017-10-17 R. Marco Figuera , B. Pham Huu , A. P. Rossi , M. Minin , J. Flahaut , A. Halder
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